Cobucci-Ponzano Beatrice, Conte Fiorella, Benelli Dario, Londei Paola, Flagiello Angela, Monti Maria, Pucci Piero, Rossi Mosè, Moracci Marco
Institute of Protein Biochemistry-Consiglio Nazionale delle Ricerche, Via P. Castellino 111, 80131 Naples, Italy.
Nucleic Acids Res. 2006;34(15):4258-68. doi: 10.1093/nar/gkl574. Epub 2006 Aug 18.
The standard rules of genetic translational decoding are altered in specific genes by different events that are globally termed recoding. In Archaea recoding has been unequivocally determined so far only for termination codon readthrough events. We study here the mechanism of expression of a gene encoding for a alpha-l-fucosidase from the archaeon Sulfolobus solfataricus (fucA1), which is split in two open reading frames separated by a -1 frameshifting. The expression in Escherichia coli of the wild-type split gene led to the production by frameshifting of full-length polypeptides with an efficiency of 5%. Mutations in the regulatory site where the shift takes place demonstrate that the expression in vivo occurs in a programmed way. Further, we identify a full-length product of fucA1 in S.solfataricus extracts, which translate this gene in vitro by following programmed -1 frameshifting. This is the first experimental demonstration that this kind of recoding is present in Archaea.
在特定基因中,遗传翻译解码的标准规则会因不同事件而改变,这些事件统称为重新编码。在古菌中,到目前为止,明确确定的重新编码仅针对终止密码子通读事件。我们在此研究来自嗜热栖热菌(Sulfolobus solfataricus)的α-L-岩藻糖苷酶编码基因(fucA1)的表达机制,该基因被一个-1移码突变分割成两个开放阅读框。野生型分裂基因在大肠杆菌中的表达通过移码产生全长多肽,效率为5%。发生移码的调控位点的突变表明体内表达是以程序化方式进行的。此外,我们在嗜热栖热菌提取物中鉴定出fucA1的全长产物,其通过遵循程序化的-1移码在体外翻译该基因。这是首次通过实验证明这种重新编码存在于古菌中。