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[对在哥伦比亚四个疟疾流行地区采集的现场样本中恶性疟原虫msp1(第2区)和dhfr(第108密码子)基因进行基因分型]

[Genotyping of the Plasmodium falciparum msp1 (block 2) and dhfr (codon 108) genes in field samples collected in four endemic Colombian localities].

作者信息

Guerra Angela Patricia, Knudson Angélica, Nicholls Rubén Santiago, Galindo John Alexander, Ravid Zaava, Rahirant Sonia, Duarte Nidia, Chaparro-Olaya Jacqueline, Wasserman Moisés

机构信息

Laboratorio de Bioquímica y Biología Celular, Instituto Nacional de Salud, Bogotá, D.C., Colombia.

出版信息

Biomedica. 2006 Mar;26(1):101-12.

Abstract

INTRODUCTION

Plasmodium falciparum is a highly polymorphic parasite, which allows it to evade the host's immune response, spread drug resistance and favours transmission.

OBJECTIVES

To analyse the genetic diversity of P. falciparum populations in samples from four endemic localities in Colombia.

MATERIALS AND METHODS

123 blood samples were collected on filter paper from patients with non-complicated P. falciparum malaria during 2002 to 2004. The samples were genotyped using polymerase chain reaction with specific primers for the polymorphic region of block 2 of the msp1 gene and the 108 codon of the dhfr gene.

RESULTS

In msp1 block 2, 95.9% (118/123; 95% CI: 90.8-98.7) of the samples harboured MAD20; 6.5% K1 (8/123; 95% CI: 2.8-12.4) and 2.4% RO33 (3/123; 95% CI: 0.5-6.9). For the dhfrgene the mutant allele N 108 was found in all the samples amplified, T 108 in 3.2% and the wild type S108 in 34.1%. Taking together all the results from both genes, 61.8% (76/123; 95% CI: 52.6-70.4) of the samples were simple infections and 38.2% (47/123; 95% CI: 29.6-47.4) were mixed infections. MAD20/N108-S108 (30.1%) was the most frequent combination among the latter.

CONCLUSIONS

Simple infections, i.e, a single allelic type in each one of the genes studied, prevailed among the circulating parasite populations. In this study the genetic composition of P. falciparum parasite populations was very homogeneous.

摘要

引言

恶性疟原虫是一种高度多态性的寄生虫,这使其能够逃避宿主的免疫反应、传播耐药性并有利于传播。

目的

分析来自哥伦比亚四个流行地区样本中恶性疟原虫种群的遗传多样性。

材料与方法

2002年至2004年期间,从患有非复杂性恶性疟原虫疟疾的患者中采集了123份滤纸血样。使用针对msp1基因第2区段多态性区域和dhfr基因第108密码子的特异性引物,通过聚合酶链反应对样本进行基因分型。

结果

在msp1第2区段中,95.9%(118/123;95%可信区间:90.8 - 98.7)的样本携带MAD20;6.5%携带K1(8/123;95%可信区间:2.8 - 12.4),2.4%携带RO33(3/123;95%可信区间:0.5 - 6.9)。对于dhfr基因,在所有扩增样本中均发现突变等位基因N108,T108占3.2%,野生型S108占34.1%。综合两个基因的所有结果,61.8%(76/123;95%可信区间:52.6 - 70.4)的样本为单纯感染,38.

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