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GTP结合与水解在核糖体上依赖EF-G的tRNA转位过程中的作用及时间。

Role and timing of GTP binding and hydrolysis during EF-G-dependent tRNA translocation on the ribosome.

作者信息

Wilden Berthold, Savelsbergh Andreas, Rodnina Marina V, Wintermeyer Wolfgang

机构信息

Institutes of Molecular Biology and Physical Biochemistry, University of Witten-Herdecke, D-58448 Witten, Germany.

出版信息

Proc Natl Acad Sci U S A. 2006 Sep 12;103(37):13670-5. doi: 10.1073/pnas.0606099103. Epub 2006 Aug 29.

Abstract

The translocation of tRNA and mRNA through the ribosome is promoted by elongation factor G (EF-G), a GTPase that hydrolyzes GTP during the reaction. Recently, it was reported that, in contrast to previous observations, the affinity of EF-G was much weaker for GTP than for GDP and that ribosome-catalyzed GDP-GTP exchange would be required for translocation [Zavialov AV, Hauryliuk VV, Ehrenberg M (2005) J Biol 4:9]. We have reinvestigated GTP/GDP binding and show that EF-G binds GTP and GDP with affinities in the 20 to 40 microM range (37 degrees C), in accordance with earlier reports. Furthermore, GDP exchange, which is extremely rapid on unbound EF-G, is retarded, rather than accelerated, on the ribosome, which, therefore, is not a nucleotide-exchange factor for EF-G. The EF-G.GDPNP complex, which is very labile, is stabilized 30,000-fold by binding to the ribosome. These findings, together with earlier kinetic results, reveal that EF-G enters the pretranslocation ribosome in the GTP-bound form and indicate that, upon ribosome-complex formation, the nucleotide-binding pocket of EF-G is closed, presumably in conjunction with GTPase activation. GTP hydrolysis is required for rapid tRNA-mRNA movement, and P(i) release induces further rearrangements of both EF-G and the ribosome that are required for EF-G turnover.

摘要

延伸因子G(EF-G)可促进tRNA和mRNA通过核糖体的易位,它是一种在反应过程中水解GTP的GTP酶。最近有报道称,与之前的观察结果相反,EF-G对GTP的亲和力比对GDP的亲和力弱得多,并且易位需要核糖体催化的GDP-GTP交换[Zavialov AV, Hauryliuk VV, Ehrenberg M (2005) J Biol 4:9]。我们重新研究了GTP/GDP结合情况,结果表明,与早期报道一致,EF-G在37摄氏度下对GTP和GDP的结合亲和力在20至40微摩尔范围内。此外,在游离的EF-G上极其快速的GDP交换,在核糖体上反而受到抑制而非加速,因此核糖体不是EF-G的核苷酸交换因子。非常不稳定的EF-G·GDPNP复合物通过与核糖体结合而稳定了30000倍。这些发现与早期的动力学结果一起表明,EF-G以结合GTP的形式进入易位前核糖体,并表明在形成核糖体复合物后,EF-G的核苷酸结合口袋关闭,推测这与GTP酶激活有关。GTP水解是tRNA-mRNA快速移动所必需的,无机磷酸(Pi)的释放会诱导EF-G和核糖体进一步重排,这是EF-G周转所必需的。

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