• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

3.5埃分辨率下PhoE孔蛋白的投影结构。

Structure of PhoE porin in projection at 3.5 A resolution.

作者信息

Jap B K, Downing K H, Walian P J

机构信息

Cell and Molecular Biology Division, Lawrence Berkeley Laboratory, University of California, Berkeley 94720.

出版信息

J Struct Biol. 1990 Mar;103(1):57-63. doi: 10.1016/1047-8477(90)90086-r.

DOI:10.1016/1047-8477(90)90086-r
PMID:1697759
Abstract

The structure of PhoE porin in projection normal to the membrane plane has been determined to a resolution of about 3.5 A by electron crystallographic techniques. The purified protein was reconstituted with lipid to form two-dimensional crystals. High resolution images and electron diffraction patterns of these specimens embedded in trehalose were recorded to obtain respectively the structure factor phase information and the more accurate values of the amplitude. The projection map shows interesting features that are not seen in the earlier map at 6.5 A. Details of the trimeric ring-like structures in our earlier map are now resolved. Each ring-like structure consists of "beads" with interbead spacings of about 4-6 A. These beads are interpreted as the projections of beta-strands along the strands' axes. At the center of the trimeric structure, there is a low density region that we proposed previously to be the location of lipopolysaccharide. Within each ring-like structure, there are complicated features which may play an important role in the size, selectivity, and stability of the channel.

摘要

通过电子晶体学技术,已确定 PhoE 孔蛋白在垂直于膜平面方向上投影的结构,分辨率约为 3.5 Å。纯化后的蛋白与脂质重构形成二维晶体。记录了嵌入海藻糖中的这些标本的高分辨率图像和电子衍射图谱,分别获得结构因子相位信息和更精确的振幅值。投影图显示出一些在早期 6.5 Å 图谱中未见到的有趣特征。我们早期图谱中三聚体环状结构的细节现在已得到解析。每个环状结构由“珠子”组成,珠子间间距约为 4 - 6 Å。这些珠子被解释为β - 链沿链轴的投影。在三聚体结构的中心,有一个低密度区域,我们之前认为这是脂多糖的位置。在每个环状结构内,存在一些复杂的特征,这些特征可能在通道的大小、选择性和稳定性方面发挥重要作用。

相似文献

1
Structure of PhoE porin in projection at 3.5 A resolution.3.5埃分辨率下PhoE孔蛋白的投影结构。
J Struct Biol. 1990 Mar;103(1):57-63. doi: 10.1016/1047-8477(90)90086-r.
2
Molecular design of PhoE porin and its functional consequences.
J Mol Biol. 1989 Jan 20;205(2):407-19. doi: 10.1016/0022-2836(89)90351-3.
3
Three-dimensional electron diffraction of PhoE porin to 2.8 A resolution.
J Mol Biol. 1990 Oct 5;215(3):429-38. doi: 10.1016/s0022-2836(05)80362-6.
4
Structural architecture of an outer membrane channel as determined by electron crystallography.通过电子晶体学确定的外膜通道的结构架构。
Nature. 1991 Mar 14;350(6314):167-70. doi: 10.1038/350167a0.
5
High-resolution electron diffraction of reconstituted PhoE porin.重组PhoE孔蛋白的高分辨率电子衍射
J Mol Biol. 1988 Jan 5;199(1):229-31. doi: 10.1016/0022-2836(88)90393-2.
6
Densely packed beta-structure at the protein-lipid interface of porin is revealed by high-resolution cryo-electron microscopy.高分辨率冷冻电子显微镜揭示了孔蛋白蛋白质-脂质界面处紧密堆积的β结构。
J Mol Biol. 1989 Sep 5;209(1):171-5. doi: 10.1016/0022-2836(89)90180-0.
7
Topology of PhoE porin: the 'eyelet' region.PhoE孔蛋白的拓扑结构:“小孔”区域
Mol Microbiol. 1993 Jan;7(1):131-40. doi: 10.1111/j.1365-2958.1993.tb01104.x.
8
Projection structure of the monomeric porin OmpG at 6 A resolution.分辨率为6埃的单体孔蛋白OmpG的投影结构。
J Mol Biol. 2001 Jan 5;305(1):71-7. doi: 10.1006/jmbi.2000.4284.
9
An 8-A projected structure of FhuA, A "ligand-gated" channel of the Escherichia coli outer membrane.大肠杆菌外膜“配体门控”通道FhuA的8-A投影结构。
J Struct Biol. 1999 Jun 15;126(2):145-55. doi: 10.1006/jsbi.1999.4115.
10
Chemical modification of the anion selectivity of the PhoE porin from the Escherichia coli outer membrane.大肠杆菌外膜中PhoE孔蛋白阴离子选择性的化学修饰。
Biochim Biophys Acta. 1984 Jul 11;774(1):67-74. doi: 10.1016/0005-2736(84)90275-x.

引用本文的文献

1
Comprehensive microcrystal electron diffraction sample preparation for cryo-EM.用于冷冻电子显微镜的综合微晶电子衍射样品制备
Nat Protoc. 2025 May;20(5):1275-1309. doi: 10.1038/s41596-024-01088-7. Epub 2024 Dec 20.
2
Structure, gating and interactions of the voltage-dependent anion channel.电压门控阴离子通道的结构、门控和相互作用。
Eur Biophys J. 2021 Mar;50(2):159-172. doi: 10.1007/s00249-021-01515-7. Epub 2021 Mar 29.
3
High-Resolution Macromolecular Structure Determination by MicroED, a cryo-EM Method.通过MicroED(一种冷冻电镜方法)进行高分辨率大分子结构测定。
Methods Enzymol. 2016;579:369-92. doi: 10.1016/bs.mie.2016.04.017. Epub 2016 Jun 16.
4
Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis.革兰氏阴性三聚体孔蛋白具有特定的脂多糖结合位点,这些位点对于孔蛋白的生物合成至关重要。
Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):E5034-43. doi: 10.1073/pnas.1602382113. Epub 2016 Aug 4.
5
Purification and biophysical characterization of the CapA membrane protein FTT0807 from Francisella tularensis.从土拉弗朗西斯菌中纯化和生物物理特性分析 CapA 膜蛋白 FTT0807。
Biochemistry. 2014 Apr 1;53(12):1958-70. doi: 10.1021/bi401644s. Epub 2014 Mar 18.
6
Lipid dynamics and protein-lipid interactions in 2D crystals formed with the β-barrel integral membrane protein VDAC1.β 桶状跨膜蛋白 VDAC1 形成的 2D 晶体中的脂质动力学和蛋白-脂质相互作用。
J Am Chem Soc. 2012 Apr 11;134(14):6375-87. doi: 10.1021/ja300347v. Epub 2012 Mar 30.
7
The use of trehalose in the preparation of specimens for molecular electron microscopy.海藻糖在制备分子电子显微镜标本中的应用。
Micron. 2011 Dec;42(8):762-72. doi: 10.1016/j.micron.2011.06.005. Epub 2011 Jun 25.
8
Specimen preparation for electron diffraction of thin crystals.薄晶体电子衍射的样品制备。
Micron. 2011 Feb;42(2):132-40. doi: 10.1016/j.micron.2010.05.003. Epub 2010 May 19.
9
7A projection map of the S-layer protein sbpA obtained with trehalose-embedded monolayer crystals.通过海藻糖包埋单层晶体获得的S层蛋白sbpA的7A投影图。
J Struct Biol. 2007 Dec;160(3):313-23. doi: 10.1016/j.jsb.2007.06.002. Epub 2007 Jun 15.
10
Predicting transmembrane beta-barrels in proteomes.预测蛋白质组中的跨膜β桶结构。
Nucleic Acids Res. 2004 May 11;32(8):2566-77. doi: 10.1093/nar/gkh580. Print 2004.