Perrin L, Pawlotsky J M, Bouvier-Alias M, Sarrazin C, Zeuzem S, Colucci G
Clinical Virology, University of Genève, Switzerland, and Department of Bacteriology and Virology, Hôpital Henri Mondor, Créteil, France.
J Clin Microbiol. 2006 Dec;44(12):4371-5. doi: 10.1128/JCM.00505-06. Epub 2006 Sep 27.
A TaqMan real-time PCR assay, the COBAS TaqMan human immunodeficiency virus (HIV) (HPS-CTMHIV) PCR assay, recently developed for the quantification of HIV type 1 RNA in plasma, was evaluated in comparison with the licensed COBAS AMPLICOR HIV-1 MONITOR (CAHIM) assay. In this study, we have analyzed the tests' sensitivities, precisions, and linearities using multiple replicates of a standard panel of HIV RNA covering a 7-logarithm range of concentrations, as well as serial threefold dilutions of high-titer clinical samples. The subtype inclusivity was also investigated, using a panel of subtypes A to H, while a collection of 160 clinical samples was analyzed to assess the tests' specificities and the systems' similarities. The results of these experiments showed that the HPS-CTMHIV assay has a sensitivity of 53 copies/ml (95% hit rate), 100% specificity, and good intra- and interassay precision. The results of the HPS-CTMHIV assay were linear in the 50- to 10(7)-copies/ml range, with a correlation coefficient (R) for expected versus observed results of 0.98. Compared to the CAHIM assay, the HPS-CTMHIV assay showed a high correlation (R=0.99) across the dynamic range of RNA concentrations that, for the CAHIM assay, requires two different sample preparations. Equivalent performances were also observed for the two systems in the detection and quantification of HIV subtypes A to H. These data indicate that the HPS-CTMHIV assay may be one of the tests of choice for monitoring viral load throughout the course of HIV infection and during highly active antiretroviral therapy.
一种用于定量血浆中1型人类免疫缺陷病毒(HIV)RNA的TaqMan实时PCR检测方法——COBAS TaqMan人类免疫缺陷病毒(HIV)(HPS - CTMHIV)PCR检测法,近期已研发出来,本研究将其与已获许可的COBAS AMPLICOR HIV - 1 MONITOR(CAHIM)检测法进行了比较评估。在本研究中,我们使用了一个覆盖7个对数浓度范围的HIV RNA标准品的多个复制品,以及高滴度临床样本的系列三倍稀释液,分析了这些检测方法的灵敏度、精密度和线性。还使用A至H型的一组亚型研究了亚型包容性,同时分析了160份临床样本的集合,以评估检测方法的特异性和系统的相似性。这些实验结果表明,HPS - CTMHIV检测法的灵敏度为53拷贝/毫升(95%命中率),特异性为100%,且批内和批间精密度良好。HPS - CTMHIV检测法的结果在50至10⁷拷贝/毫升范围内呈线性,预期结果与观察结果的相关系数(R)为0.98。与CAHIM检测法相比,HPS - CTMHIV检测法在RNA浓度的动态范围内显示出高度相关性(R = 0.99),而对于CAHIM检测法,该动态范围需要两种不同的样本制备方法。在检测和定量HIV A至H亚型方面,两个系统也观察到了等效的性能。这些数据表明HPS - CTMHIV检测法可能是在HIV感染全过程以及高效抗逆转录病毒治疗期间监测病毒载量的首选检测方法之一。