Okorokov Andrei L, Sherman Michael B, Plisson Celia, Grinkevich Vera, Sigmundsson Kristmundur, Selivanova Galina, Milner Jo, Orlova Elena V
Department of Pathology, Royal Free and University College Medical School, University College London, London, UK.
EMBO J. 2006 Nov 1;25(21):5191-200. doi: 10.1038/sj.emboj.7601382. Epub 2006 Oct 19.
p53 major tumour suppressor protein has presented a challenge for structural biology for two decades. The intact and complete p53 molecule has eluded previous attempts to obtain its structure, largely due to the intrinsic flexibility of the protein. Using ATP-stabilised p53, we have employed cryoelectron microscopy and single particle analysis to solve the first three-dimensional structure of the full-length p53 tetramer (resolution 13.7 A). The p53 molecule is a D2 tetramer, resembling a hollow skewed cube with node-like vertices of two sizes. Four larger nodes accommodate central core domains, as was demonstrated by fitting of its X-ray structure. The p53 monomers are connected via their juxtaposed N- and C-termini within smaller N/C nodes to form dimers. The dimers form tetramers through the contacts between core nodes and N/C nodes. This structure revolutionises existing concepts of p53's molecular organisation and resolves conflicting data relating to its biochemical properties. This architecture of p53 in toto suggests novel mechanisms for structural plasticity, which enables the protein to bind variably spaced DNA target sequences, essential for p53 transactivation and tumour suppressor functions.
二十年来,p53主要肿瘤抑制蛋白一直是结构生物学面临的一个挑战。完整的p53分子一直未能通过之前的尝试获得其结构,这主要是由于该蛋白固有的灵活性。利用ATP稳定的p53,我们采用冷冻电子显微镜和单颗粒分析来解析全长p53四聚体的首个三维结构(分辨率为13.7埃)。p53分子是一个D2四聚体,类似于一个空心的斜立方体,有两种尺寸的节点状顶点。四个较大的节点容纳中央核心结构域,这通过其X射线结构的拟合得到了证明。p53单体通过其在较小的N/C节点内并列的N端和C端相连形成二聚体。二聚体通过核心节点和N/C节点之间的接触形成四聚体。这种结构彻底改变了现有的p53分子组织概念,并解决了与其生化特性相关的相互矛盾的数据。p53的这种整体结构暗示了结构可塑性的新机制,这使得该蛋白能够结合间距可变的DNA靶序列,这对p53的反式激活和肿瘤抑制功能至关重要。