Suppr超能文献

视紫红质光激活去质子化中间体的晶体结构。

Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.

作者信息

Salom David, Lodowski David T, Stenkamp Ronald E, Le Trong Isolde, Golczak Marcin, Jastrzebska Beata, Harris Tim, Ballesteros Juan A, Palczewski Krzysztof

机构信息

Novasite Pharmaceuticals Inc., San Diego, CA 92121, USA.

出版信息

Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16123-8. doi: 10.1073/pnas.0608022103. Epub 2006 Oct 23.

Abstract

The changes that lead to activation of G protein-coupled receptors have not been elucidated at the structural level. In this work we report the crystal structures of both ground state and a photoactivated deprotonated intermediate of bovine rhodopsin at a resolution of 4.15 A. In the photoactivated state, the Schiff base linking the chromophore and Lys-296 becomes deprotonated, reminiscent of the G protein-activating state, metarhodopsin II. The structures reveal that the changes that accompany photoactivation are smaller than previously predicted for the metarhodopsin II state and include changes on the cytoplasmic surface of rhodopsin that possibly enable the coupling to its cognate G protein, transducin. Furthermore, rhodopsin forms a potentially physiologically relevant dimer interface that involves helices I, II, and 8, and when taken with the prior work that implicates helices IV and V as the physiological dimer interface may account for one of the interfaces of the oligomeric structure of rhodopsin seen in the membrane by atomic force microscopy. The activation and oligomerization models likely extend to the majority of other G protein-coupled receptors.

摘要

导致G蛋白偶联受体激活的变化在结构层面尚未阐明。在这项工作中,我们报告了牛视紫红质基态和光激活去质子化中间体的晶体结构,分辨率为4.15埃。在光激活状态下,连接发色团和赖氨酸-296的席夫碱去质子化,这让人联想到G蛋白激活状态,即变视紫红质II。这些结构表明,伴随光激活的变化比之前预测的变视紫红质II状态要小,并且包括视紫红质胞质表面的变化,这些变化可能使其能够与同源G蛋白转导素偶联。此外,视紫红质形成了一个潜在的生理相关二聚体界面,该界面涉及螺旋I、II和8,并且结合之前将螺旋IV和V作为生理二聚体界面的研究,这可能解释了原子力显微镜在膜中看到的视紫红质寡聚体结构的一个界面。激活和寡聚化模型可能扩展到大多数其他G蛋白偶联受体。

相似文献

1
Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.视紫红质光激活去质子化中间体的晶体结构。
Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16123-8. doi: 10.1073/pnas.0608022103. Epub 2006 Oct 23.
2
Crystal structure of squid rhodopsin.鱿鱼视紫红质的晶体结构。
Nature. 2008 May 15;453(7193):363-7. doi: 10.1038/nature06925.
3
Crystal structure of metarhodopsin II.视紫红质 II 的晶体结构。
Nature. 2011 Mar 31;471(7340):651-5. doi: 10.1038/nature09789. Epub 2011 Mar 9.
5
Structure of bovine rhodopsin in a trigonal crystal form.三角晶型牛视紫红质的结构
J Mol Biol. 2004 Nov 5;343(5):1409-38. doi: 10.1016/j.jmb.2004.08.090.
6
7
Electron crystallography reveals the structure of metarhodopsin I.电子晶体学揭示了视紫红质I的结构。
EMBO J. 2004 Sep 15;23(18):3609-20. doi: 10.1038/sj.emboj.7600374. Epub 2004 Aug 26.

引用本文的文献

5
Orphan G protein-coupled receptors: the ongoing search for a home.孤儿G蛋白偶联受体:仍在寻找归属
Front Pharmacol. 2024 Feb 29;15:1349097. doi: 10.3389/fphar.2024.1349097. eCollection 2024.

本文引用的文献

1
Local peptide movement in the photoreaction intermediate of rhodopsin.视紫红质光反应中间体中的局部肽段移动。
Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12729-34. doi: 10.1073/pnas.0601765103. Epub 2006 Aug 14.
3
G protein-coupled receptor rhodopsin.G蛋白偶联受体视紫红质
Annu Rev Biochem. 2006;75:743-67. doi: 10.1146/annurev.biochem.75.103004.142743.
4
Crystallographic analysis of primary visual photochemistry.初级视觉光化学的晶体学分析
Angew Chem Int Ed Engl. 2006 Jun 26;45(26):4270-3. doi: 10.1002/anie.200600595.
8
Structure of bovine rhodopsin in a trigonal crystal form.三角晶型牛视紫红质的结构
J Mol Biol. 2004 Nov 5;343(5):1409-38. doi: 10.1016/j.jmb.2004.08.090.
10
Electron crystallography reveals the structure of metarhodopsin I.电子晶体学揭示了视紫红质I的结构。
EMBO J. 2004 Sep 15;23(18):3609-20. doi: 10.1038/sj.emboj.7600374. Epub 2004 Aug 26.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验