Dehareng Dominique, Dive Georges
Centre d'Ingéniérie des Protéines, Institut de Chimie B6a, Sart Tilman, B4000, Liège, Belgium.
J Phys Chem A. 2006 Nov 2;110(43):11975-87. doi: 10.1021/jp064255w.
The energies of the fundamental and several excited states of tetrapeptide radical cations were determined at the outer valence Green's function (OVGF) level, at three geometries corresponding to the lowest energy conformations: two for the neutral and one for the cation. The conformations were optimized at the density functional theory level within the B3LYP framework. It was found that, from a purely energetic point of view, a charge initially created on the tyrosine chromophore could migrate without any geometrical change and without further activation once the excited electronic state of the ionized chromophore was formed. This migration could reach the NH(2) terminus for the neutral conformations but should stop at the adjacent peptide link for the cation conformation. These results stress the probable influence of the electronic coupling between the states rather than the existence of a barrier on the charge pathway to explain the difference between the peptides in the charge-transfer process leading to the loss of an iminium NH(2)=CHR cation. The dissociation energy of the asymptote related to the formation of this NH(2) terminus iminium cation was calculated for few species and it appears that the excess energy available for dissociation is significant when starting from the lowest energy conformations of the neutral or the cation, provided that the charge transfer is effective. It was also found that the amino acids did not conserve their energetic properties and their zero order energy levels turned to a complete new energetic scheme corresponding to the conformation of the peptide.
在与最低能量构象相对应的三种几何结构下,采用外价格林函数(OVGF)方法,确定了四肽自由基阳离子基态和几个激发态的能量:中性态有两种构象,阳离子态有一种构象。这些构象在密度泛函理论水平下于B3LYP框架内进行了优化。结果发现,从纯粹的能量角度来看,一旦形成离子化发色团的激发电子态,最初在酪氨酸发色团上产生的电荷能够在不发生任何几何变化且无需进一步活化的情况下迁移。对于中性构象,这种迁移可以到达NH(2)末端,但对于阳离子构象,电荷迁移应在相邻的肽键处停止。这些结果强调了态间电子耦合的可能影响,而非电荷转移过程中电荷路径上存在势垒来解释肽之间在导致亚胺离子NH(2)=CHR阳离子损失的电荷转移过程中的差异。针对少数物种计算了与该NH(2)末端亚胺离子形成相关的渐近线离解能,结果表明,从中性态或阳离子态的最低能量构象出发,只要电荷转移有效,可用于离解的过剩能量就很显著。还发现氨基酸并不保留其能量性质,其零级能级转变为与肽构象相对应的全新能量方案。