• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用固态核磁共振技术研究抗菌肽鲎素I的膜结合构象和拓扑结构

Membrane-bound conformation and topology of the antimicrobial peptide tachyplesin I by solid-state NMR.

作者信息

Doherty Tim, Waring Alan J, Hong M

机构信息

Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA.

出版信息

Biochemistry. 2006 Nov 7;45(44):13323-30. doi: 10.1021/bi061424u.

DOI:10.1021/bi061424u
PMID:17073453
Abstract

The conformation and membrane topology of the disulfide-stabilized antimicrobial peptide tachyplesin I (TP) in lipid bilayers are determined by solid-state NMR spectroscopy. The backbone (phi and psi) torsion angles of Val(6) are found to be -133 degrees and 142 degrees , respectively, and the Val(6) CO-Phe(8) H(N) distance is 4.6 A. These constrain the middle of the N-terminal strand to a relatively ideal antiparallel beta-sheet conformation. In contrast, the phi angle of Gly(10) is +/-85 degrees , consistent with a beta-turn conformation. Thus, TP adopts a beta-hairpin conformation with straight strands, similar to its structure in aqueous solution but different from a recently reported structure in DPC micelles where bending of the two beta-strands was observed. The Val(6) and Gly(10) CO groups are both 6.8 A from the lipid (31)P, while the Val(6) side chain is in (1)H spin diffusion contact with the lipid acyl chains. These results suggest that TP is immersed in the glycerol backbone region of the membrane and is oriented roughly parallel to the plane of the membrane. This depth of insertion and orientation differs from those of the analogous beta-sheet antimicrobial peptide protegrin-1 and suggest the importance of structural amphiphilicity in determining the location and orientation of membrane peptides in lipid bilayers.

摘要

利用固态核磁共振波谱法测定了二硫键稳定的抗菌肽鲎素I(TP)在脂质双层中的构象和膜拓扑结构。发现Val(6)的主链(φ和ψ)扭转角分别为-133°和142°,且Val(6)的羰基与Phe(8)的氨基氢之间的距离为4.6 Å。这些数据将N端链的中部限制为相对理想的反平行β-折叠构象。相比之下,Gly(10)的φ角为±85°,符合β-转角构象。因此,TP采用具有直链的β-发夹构象,与其在水溶液中的结构相似,但与最近报道的在DPC胶束中的结构不同,后者观察到两条β-链发生了弯曲。Val(6)和Gly(10)的羰基与脂质的(31)P均相距6.8 Å,而Val(6)的侧链与脂质酰基链处于(1)H自旋扩散接触。这些结果表明TP嵌入膜的甘油主链区域,且大致平行于膜平面定向。这种插入深度和定向与类似的β-折叠抗菌肽protegrin-1不同,表明结构两亲性在决定膜肽在脂质双层中的位置和定向方面的重要性。

相似文献

1
Membrane-bound conformation and topology of the antimicrobial peptide tachyplesin I by solid-state NMR.利用固态核磁共振技术研究抗菌肽鲎素I的膜结合构象和拓扑结构
Biochemistry. 2006 Nov 7;45(44):13323-30. doi: 10.1021/bi061424u.
2
Dynamic structure of disulfide-removed linear analogs of tachyplesin-I in the lipid bilayer from solid-state NMR.基于固态核磁共振的鲎素-I去二硫键线性类似物在脂质双分子层中的动态结构
Biochemistry. 2008 Jan 29;47(4):1105-16. doi: 10.1021/bi701390t. Epub 2007 Dec 29.
3
Orientation of a beta-hairpin antimicrobial peptide in lipid bilayers from two-dimensional dipolar chemical-shift correlation NMR.通过二维偶极化学位移相关核磁共振确定β-发夹抗菌肽在脂质双层中的取向
Biophys J. 2006 May 15;90(10):3616-24. doi: 10.1529/biophysj.105.062075. Epub 2006 Feb 24.
4
Deletion of all cysteines in tachyplesin I abolishes hemolytic activity and retains antimicrobial activity and lipopolysaccharide selective binding.将鲎素I中的所有半胱氨酸删除可消除溶血活性,并保留抗菌活性和脂多糖选择性结合能力。
Biochemistry. 2006 May 23;45(20):6529-40. doi: 10.1021/bi052629q.
5
Conformation, dynamics, and insertion of a noncysteine-containing protegrin-1 analogue in lipid membranes from solid-state NMR spectroscopy.通过固态核磁共振光谱研究不含半胱氨酸的protegrin-1类似物在脂质膜中的构象、动力学及插入情况。
Chembiochem. 2007 Oct 15;8(15):1877-84. doi: 10.1002/cbic.200700335.
6
Structural effects of tachyplesin I and its linear derivative on their aggregation and mobility in lipid bilayers.鲎素I及其线性衍生物在脂质双层中的聚集和流动性的结构效应。
J Mol Graph Model. 2015 Jun;59:123-8. doi: 10.1016/j.jmgm.2015.04.007. Epub 2015 Apr 27.
7
Membrane-dependent oligomeric structure and pore formation of a beta-hairpin antimicrobial peptide in lipid bilayers from solid-state NMR.基于固态核磁共振的β-发夹抗菌肽在脂质双层中的膜依赖性寡聚结构及孔形成
Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16242-7. doi: 10.1073/pnas.0605079103. Epub 2006 Oct 23.
8
Peptide-lipid interactions of the beta-hairpin antimicrobial peptide tachyplesin and its linear derivatives from solid-state NMR.来自固态核磁共振的β-发夹抗菌肽鲎素及其线性衍生物的肽-脂质相互作用
Biochim Biophys Acta. 2006 Sep;1758(9):1285-91. doi: 10.1016/j.bbamem.2006.03.016. Epub 2006 Apr 5.
9
Structure, activity and interactions of the cysteine deleted analog of tachyplesin-1 with lipopolysaccharide micelle: Mechanistic insights into outer-membrane permeabilization and endotoxin neutralization.鲎素-1半胱氨酸缺失类似物与脂多糖胶束的结构、活性及相互作用:外膜通透化和内毒素中和的机制洞察
Biochim Biophys Acta. 2012 Jul;1818(7):1613-24. doi: 10.1016/j.bbamem.2012.03.015.
10
Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.鲎抗菌肽I(一种源自鲎的抗菌肽)与脂多糖之间的相互作用。
Biochim Biophys Acta. 2014 Mar;1844(3):527-34. doi: 10.1016/j.bbapap.2013.12.017. Epub 2014 Jan 2.

引用本文的文献

1
Pseudo-Phosphorylated Tau Forms Paired Helical Filaments in the Presence of High-Curvature Cholesterol-Containing Lipid Membranes.在高曲率含胆固醇脂质膜存在的情况下,假磷酸化tau蛋白形成双螺旋丝。
J Am Chem Soc. 2025 Jan 22;147(3):2510-2522. doi: 10.1021/jacs.4c13772. Epub 2025 Jan 9.
2
Conformation and Trimer Association of the Transmembrane Domain of the Parainfluenza Virus Fusion Protein in Lipid Bilayers from Solid-State NMR: Insights into the Sequence Determinants of Trimer Structure and Fusion Activity.固态 NMR 研究副黏病毒融合蛋白跨膜区在脂双层中的构象和三聚体缔合:对三聚体结构和融合活性的序列决定因素的深入了解。
J Mol Biol. 2018 Mar 2;430(5):695-709. doi: 10.1016/j.jmb.2018.01.002. Epub 2018 Jan 10.
3
Transmembrane Pore Structures of β-Hairpin Antimicrobial Peptides by All-Atom Simulations.
全原子模拟研究 β-发夹型抗菌肽的跨膜孔道结构。
J Phys Chem B. 2017 Oct 5;121(39):9126-9140. doi: 10.1021/acs.jpcb.7b06591. Epub 2017 Sep 21.
4
Multiple locations of peptides in the hydrocarbon core of gel-phase membranes revealed by peptide (13)C to lipid (2)H rotational-echo double-resonance solid-state nuclear magnetic resonance.通过肽(¹³C)到脂质(²H)旋转回波双共振固态核磁共振揭示凝胶相膜烃核中肽的多个位置。
Biochemistry. 2015 Jan 27;54(3):677-84. doi: 10.1021/bi501211x. Epub 2015 Jan 9.
5
Implicit Membrane Investigation of the Stability of Antimicrobial Peptide β-Barrels and Arcs.抗菌肽β桶和弧形结构稳定性的隐式膜研究
J Membr Biol. 2015 Jun;248(3):469-86. doi: 10.1007/s00232-014-9759-4. Epub 2014 Nov 28.
6
Solid-state nuclear magnetic resonance measurements of HIV fusion peptide 13CO to lipid 31P proximities support similar partially inserted membrane locations of the α helical and β sheet peptide structures.固态核磁共振测量 HIV 融合肽 13CO 与脂质 31P 的接近程度,支持 α 螺旋和 β 片肽结构的类似部分插入膜位置。
J Phys Chem A. 2013 Oct 3;117(39):9848-59. doi: 10.1021/jp312845w. Epub 2013 Feb 28.
7
Residue-specific membrane location of peptides and proteins using specifically and extensively deuterated lipids and ¹³C-²H rotational-echo double-resonance solid-state NMR.使用特异性和广泛氘化的脂质和 ¹³C-²H 旋转回波双共振固态 NMR 对肽和蛋白质进行残基特异性膜定位。
J Biomol NMR. 2013 Jan;55(1):11-7. doi: 10.1007/s10858-012-9692-8. Epub 2012 Dec 8.
8
Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR.阳离子膜肽:固态 NMR 研究结构-活性关系的原子水平见解。
Amino Acids. 2013 Mar;44(3):821-33. doi: 10.1007/s00726-012-1421-9. Epub 2012 Oct 30.
9
Determining the orientation and localization of membrane-bound peptides.确定膜结合肽的取向和定位。
Curr Protein Pept Sci. 2012 May;13(3):267-79. doi: 10.2174/138920312800785049.
10
Structure and dynamics of cationic membrane peptides and proteins: insights from solid-state NMR.阳离子膜肽和蛋白质的结构与动力学:固态 NMR 的研究进展。
Protein Sci. 2011 Apr;20(4):641-55. doi: 10.1002/pro.600. Epub 2011 Mar 7.