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利用固态核磁共振技术研究抗菌肽鲎素I的膜结合构象和拓扑结构

Membrane-bound conformation and topology of the antimicrobial peptide tachyplesin I by solid-state NMR.

作者信息

Doherty Tim, Waring Alan J, Hong M

机构信息

Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA.

出版信息

Biochemistry. 2006 Nov 7;45(44):13323-30. doi: 10.1021/bi061424u.

Abstract

The conformation and membrane topology of the disulfide-stabilized antimicrobial peptide tachyplesin I (TP) in lipid bilayers are determined by solid-state NMR spectroscopy. The backbone (phi and psi) torsion angles of Val(6) are found to be -133 degrees and 142 degrees , respectively, and the Val(6) CO-Phe(8) H(N) distance is 4.6 A. These constrain the middle of the N-terminal strand to a relatively ideal antiparallel beta-sheet conformation. In contrast, the phi angle of Gly(10) is +/-85 degrees , consistent with a beta-turn conformation. Thus, TP adopts a beta-hairpin conformation with straight strands, similar to its structure in aqueous solution but different from a recently reported structure in DPC micelles where bending of the two beta-strands was observed. The Val(6) and Gly(10) CO groups are both 6.8 A from the lipid (31)P, while the Val(6) side chain is in (1)H spin diffusion contact with the lipid acyl chains. These results suggest that TP is immersed in the glycerol backbone region of the membrane and is oriented roughly parallel to the plane of the membrane. This depth of insertion and orientation differs from those of the analogous beta-sheet antimicrobial peptide protegrin-1 and suggest the importance of structural amphiphilicity in determining the location and orientation of membrane peptides in lipid bilayers.

摘要

利用固态核磁共振波谱法测定了二硫键稳定的抗菌肽鲎素I(TP)在脂质双层中的构象和膜拓扑结构。发现Val(6)的主链(φ和ψ)扭转角分别为-133°和142°,且Val(6)的羰基与Phe(8)的氨基氢之间的距离为4.6 Å。这些数据将N端链的中部限制为相对理想的反平行β-折叠构象。相比之下,Gly(10)的φ角为±85°,符合β-转角构象。因此,TP采用具有直链的β-发夹构象,与其在水溶液中的结构相似,但与最近报道的在DPC胶束中的结构不同,后者观察到两条β-链发生了弯曲。Val(6)和Gly(10)的羰基与脂质的(31)P均相距6.8 Å,而Val(6)的侧链与脂质酰基链处于(1)H自旋扩散接触。这些结果表明TP嵌入膜的甘油主链区域,且大致平行于膜平面定向。这种插入深度和定向与类似的β-折叠抗菌肽protegrin-1不同,表明结构两亲性在决定膜肽在脂质双层中的位置和定向方面的重要性。

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