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2
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本文引用的文献

1
Nucleotide binding domain interactions during the mechanochemical reaction cycle of ATP-binding cassette transporters.ATP结合盒转运蛋白机械化学反应循环过程中的核苷酸结合域相互作用。
J Bioenerg Biomembr. 2005 Dec;37(6):475-9. doi: 10.1007/s10863-005-9494-8.
2
Chimeras of the ABC drug transporter Cdr1p reveal functional indispensability of transmembrane domains and nucleotide-binding domains, but transmembrane segment 12 is replaceable with the corresponding homologous region of the non-drug transporter Cdr3p.ABC药物转运蛋白Cdr1p的嵌合体揭示了跨膜结构域和核苷酸结合结构域在功能上的不可或缺性,但跨膜片段12可被非药物转运蛋白Cdr3p的相应同源区域替代。
Microbiology (Reading). 2006 May;152(Pt 5):1559-1573. doi: 10.1099/mic.0.28471-0.
3
Functional characterization of N-terminal nucleotide binding domain (NBD-1) of a major ABC drug transporter Cdr1p of Candida albicans: uncommon but conserved Trp326 of Walker B is important for ATP binding.白色念珠菌主要ABC药物转运蛋白Cdr1p的N端核苷酸结合结构域(NBD-1)的功能特性:沃克B基序中不常见但保守的色氨酸326对ATP结合很重要。
Biochemistry. 2005 May 3;44(17):6650-61. doi: 10.1021/bi0474160.
4
Nucleotide dissociation from NBD1 promotes solute transport by MRP1.核苷酸从NBD1解离可促进MRP1介导的溶质转运。
Biochim Biophys Acta. 2005 Mar 1;1668(2):248-61. doi: 10.1016/j.bbamem.2004.12.013.
5
Regulated overexpression of CDR1 in Candida albicans confers multidrug resistance.白色念珠菌中CDR1的调控性过表达赋予多重耐药性。
J Antimicrob Chemother. 2004 Dec;54(6):999-1006. doi: 10.1093/jac/dkh456. Epub 2004 Oct 14.
6
ABC multidrug transporter Cdr1p of Candida albicans has divergent nucleotide-binding domains which display functional asymmetry.白色念珠菌的ABC多药转运蛋白Cdr1p具有不同的核苷酸结合结构域,这些结构域表现出功能不对称性。
FEMS Yeast Res. 2004 Oct;5(1):63-72. doi: 10.1016/j.femsyr.2004.07.002.
7
Proteomic response to amino acid starvation in Candida albicans and Saccharomyces cerevisiae.白色念珠菌和酿酒酵母对氨基酸饥饿的蛋白质组学反应。
Proteomics. 2004 Aug;4(8):2425-36. doi: 10.1002/pmic.200300760.
8
Functional characterization of Candida albicans ABC transporter Cdr1p.白色念珠菌ABC转运蛋白Cdr1p的功能表征
Eukaryot Cell. 2003 Dec;2(6):1361-75. doi: 10.1128/EC.2.6.1361-1375.2003.
9
Analysis of catalytic carboxylate mutants E552Q and E1197Q suggests asymmetric ATP hydrolysis by the two nucleotide-binding domains of P-glycoprotein.对催化性羧酸盐突变体E552Q和E1197Q的分析表明,P-糖蛋白的两个核苷酸结合结构域存在不对称ATP水解。
Biochemistry. 2003 Nov 11;42(44):12875-85. doi: 10.1021/bi034257w.
10
Covalent modification of cysteine 193 impairs ATPase function of nucleotide-binding domain of a Candida drug efflux pump.半胱氨酸193的共价修饰会损害白色念珠菌药物外排泵核苷酸结合结构域的ATP酶功能。
Biochem Biophys Res Commun. 2003 Oct 24;310(3):869-75. doi: 10.1016/j.bbrc.2003.09.094.

白色念珠菌Cdr1p的N端核苷酸结合结构域(NBD-1)中沃克B模体保守的Asp327在ATP水解中获得了新功能。

Conserved Asp327 of walker B motif in the N-terminal nucleotide binding domain (NBD-1) of Cdr1p of Candida albicans has acquired a new role in ATP hydrolysis.

作者信息

Rai Versha, Gaur Manisha, Shukla Sudhanshu, Shukla Suneet, Ambudkar Suresh V, Komath Sneha Sudha, Prasad Rajendra

机构信息

Membrane Biology Laboratory, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India.

出版信息

Biochemistry. 2006 Dec 12;45(49):14726-39. doi: 10.1021/bi061535t.

DOI:10.1021/bi061535t
PMID:17144665
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2526123/
Abstract

The Walker A and B motifs of nucleotide binding domains (NBDs) of Cdr1p though almost identical to all ABC transporters, has unique substitutions. We have shown in the past that Trp326 of Walker B and Cys193 of Walker A motifs of N-terminal NBD of Cdr1p have distinct roles in ATP binding and hydrolysis, respectively. In the present study, we have examined the role of a well conserved Asp327 in the Walker B motif of the N-terminal NBD, which is preceded (Trp326) and followed (Asn328) by atypical amino acid substitutions and compared it with its equivalent well conserved Asp1026 of the C-terminal NBD of Cdr1p. We observed that the removal of the negative charge by D327N, D327A, D1026N, D1026A, and D327N/D1026N substitutions, resulted in Cdr1p mutant variants that were severely impaired in ATPase activity and drug efflux. Importantly, all of the mutant variants showed characteristics similar to those of the wild type with respect to cell surface expression and photoaffinity drug analogue [125I] IAAP and [3H] azidopine labeling. Although the Cdr1p D327N mutant variant showed comparable binding with [alpha-32P] 8-azido ATP, Cdr1p D1026N and Cdr1p D327N/D1026N mutant variants were crippled in nucleotide binding. That the two conserved carboxylate residues Asp327 and Asp1026 are functionally different was further evident from the pH profile of ATPase activity. The Cdr1p D327N mutant variant showed approximately 40% enhancement of its residual ATPase activity at acidic pH, whereas no such pH effect was seen with the Cdr1p D1026N mutant variant. Our experimental data suggest that Asp327 of N-terminal NBD has acquired a new role to act as a catalytic base in ATP hydrolysis, a role normally conserved for Glu present adjacent to the conserved Asp in the Walker B motif of all the non-fungal transporters.

摘要

Cdr1p核苷酸结合结构域(NBDs)的沃克A和B基序虽然与所有ABC转运蛋白几乎相同,但有独特的取代。我们过去已经表明,Cdr1p N端NBD的沃克B基序中的Trp326和沃克A基序中的Cys193分别在ATP结合和水解中具有不同作用。在本研究中,我们研究了N端NBD的沃克B基序中一个保守的Asp327的作用,该基序之前(Trp326)和之后(Asn328)都有非典型氨基酸取代,并将其与其在Cdr1p C端NBD中对应的保守Asp1026进行了比较。我们观察到,通过D327N、D327A、D1026N、D1026A和D327N/D1026N取代去除负电荷,导致Cdr1p突变变体的ATP酶活性和药物外排严重受损。重要的是,所有突变变体在细胞表面表达以及光亲和性药物类似物[125I]IAAP和[3H]叠氮平标记方面表现出与野生型相似的特征。尽管Cdr1p D327N突变变体与[α-32P]8-叠氮ATP的结合相当,但Cdr1p D1026N和Cdr1p D327N/D1026N突变变体在核苷酸结合方面存在缺陷。两个保守的羧酸盐残基Asp327和Asp1026在功能上不同,这从ATP酶活性的pH曲线中进一步明显看出。Cdr1p D327N突变变体在酸性pH下其残余ATP酶活性提高了约40%,而Cdr1p D1026N突变变体则没有这种pH效应。我们的实验数据表明,N端NBD的Asp327获得了一个新作用,即作为ATP水解中的催化碱基,这一作用通常由所有非真菌转运蛋白沃克B基序中保守Asp相邻的Glu所保留。