Yang Tran-Chin, McNaughton Rebecca L, Clay Michael D, Jenney Francis E, Krishnan Rangan, Kurtz Donald M, Adams Michael W W, Johnson Michael K, Hoffman Brian M
Department of Chemistry and Biochemistry, Center for Metalloenzyme Studies, University of Georgia, Athens, GA 30602, USA
J Am Chem Soc. 2006 Dec 27;128(51):16566-78. doi: 10.1021/ja064656p.
Superoxide reductase (SOR) and P450 enzymes contain similar [Fe(N)4(SCys)] active sites and, although they catalyze very different reactions, are proposed to involve analogous low-spin (hydro)peroxo-Fe(III) intermediates in their respective mechanisms that can be modeled by cyanide binding. The equatorial FeN4 ligation by four histidine ligands in CN-SOR and the heme in CN-P450cam is directly compared by 14N ENDOR, while the axial Fe-CN and Fe-S bonding is probed by 13C ENDOR of the cyanide ligand and 1Hbeta ENDOR measurements to determine the spin density delocalization onto the cysteine sulfur. There are small, but notable, differences in the bonding between Fe(III) and its ligands in the two enzymes. The ENDOR measurements are complemented by DFT computations that support the semiempirical equation used to compute spin densities on metal-coordinated cysteinyl and shed light on bonding changes as the Fe-C-N linkage bends. They further indicate that H bonds to the cysteinyl thiolate sulfur ligand reduce the spin density on the sulfur in both active sites to a degree that exceeds the difference induced by the alternative sets of "in-plane" nitrogen ligands.
超氧化物还原酶(SOR)和细胞色素P450酶含有相似的[Fe(N)4(SCys)]活性位点,尽管它们催化的反应截然不同,但有人提出它们在各自的机制中涉及类似的低自旋(氢)过氧-Fe(III)中间体,这可以通过氰化物结合来模拟。通过14N ENDOR直接比较了CN-SOR中四个组氨酸配体和CN-P450cam中血红素对赤道面FeN4的配位情况,同时通过氰化物配体的13C ENDOR和1Hβ ENDOR测量来探测轴向Fe-CN和Fe-S键,以确定自旋密度在半胱氨酸硫原子上的离域情况。两种酶中Fe(III)与其配体之间的键合存在微小但显著的差异。ENDOR测量得到了DFT计算的补充,DFT计算支持了用于计算金属配位半胱氨酰自旋密度的半经验方程,并揭示了随着Fe-C-N键弯曲时的键合变化。它们进一步表明,与半胱氨酰硫醇盐硫配体形成的氢键将两个活性位点中硫原子上的自旋密度降低到一定程度,超过了由不同“面内”氮配体组引起的差异。