Konishi Teruko, Takeda Takumi, Miyazaki Yasumasa, Ohnishi-Kameyama Mayumi, Hayashi Takahisa, O'Neill Malcolm A, Ishii Tadashi
Forestry and Forest Products Research Institute, Tsukuba, Ibaraki, Japan.
Glycobiology. 2007 Mar;17(3):345-54. doi: 10.1093/glycob/cwl081. Epub 2006 Dec 20.
Plant cell walls constitute the bulk of the earth renewable source of energy and are a component in the diet of humans and herbivores. l-Arabinofuranosyl (Araf) residues are a quantifiably important constituent of these walls. Plants use uridine diphosphate (UDP)-l-arabinofuranose (UDP-Araf) to donate Araf residues in the biosynthesis of Araf-containing polysaccharides, proteoglycans, and glycoproteins. However, little is known about the formation of UDP-Araf. We now describe the purification and partial characterization of a rice UDP-arabinopyranose mutase (UAM) that catalyzes the formation of UDP-Araf from UDP-arabinopyranose (UDP-Arap). The reaction is reversible and at thermodynamic equilibrium the pyranose form is favored over the furanose form (90 : 10). Three related proteins that are encoded by rice gene loci Os03g40270, Os04g56520, and Os07g41360 were identified from partial amino acid sequences of UAM. These proteins have >80% sequence identity with polypeptides that are reversibly glycosylated in the presence of UDP-sugars. The rice mutase and two functionally active recombinant mutases were shown to be reversibly glycosylated in the presence of UDP-Glc. The cofactor, flavin-adenine-dinucleotide (FAD), is required for the catalytic activity of UDP-galactose mutases of prokaryotes, fungi, and protozoa. The plant mutases, which do not require a cofactor, must therefore have a different catalytic mechanism. Putative UAM-encoding genes are present in the green algae Chlamydomonas reinhardtii, the moss Physcomitrella patens, the gymnosperm Pinus taeda (loblolly pine), and in numerous dicots and monocots, indicating that UAMs are widespread in green plants.
植物细胞壁构成了地球上大部分可再生能源,并且是人类和食草动物饮食的组成部分。L-阿拉伯呋喃糖(Araf)残基是这些细胞壁中数量可观的重要成分。植物利用尿苷二磷酸(UDP)-L-阿拉伯呋喃糖(UDP-Araf)在含Araf的多糖、蛋白聚糖和糖蛋白的生物合成中提供Araf残基。然而,关于UDP-Araf的形成知之甚少。我们现在描述了一种水稻UDP-阿拉伯吡喃糖变位酶(UAM)的纯化和部分特性,该酶催化由UDP-阿拉伯吡喃糖(UDP-Arap)形成UDP-Araf。该反应是可逆的,在热力学平衡时,吡喃糖形式比呋喃糖形式更受青睐(90:10)。从UAM的部分氨基酸序列中鉴定出由水稻基因座Os03g40270、Os04g56520和Os07g41360编码的三种相关蛋白质。这些蛋白质与在UDP-糖存在下可逆糖基化的多肽具有>80%的序列同一性。水稻变位酶和两种具有功能活性的重组变位酶在UDP-Glc存在下被证明是可逆糖基化的。辅因子黄素腺嘌呤二核苷酸(FAD)是原核生物、真菌和原生动物的UDP-半乳糖变位酶催化活性所必需的。因此,不需要辅因子的植物变位酶必定具有不同的催化机制。在绿藻莱茵衣藻、苔藓小立碗藓、裸子植物火炬松(湿地松)以及许多双子叶植物和单子叶植物中都存在推定的UAM编码基因,这表明UAM在绿色植物中广泛存在。