• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

人Nod1半胱天冬酶招募结构域的纯化、结晶及初步晶体学表征

Purification, crystallization and preliminary crystallographic characterization of the caspase-recruitment domain of human Nod1.

作者信息

Srimathi Thiagarajan, Robbins Sheila L, Dubas Rachel L, Seo Jang Hoon, Park Young Chul

机构信息

Basic Science, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jan 1;63(Pt 1):21-3. doi: 10.1107/S1744309106051955. Epub 2006 Dec 16.

DOI:10.1107/S1744309106051955
PMID:17183166
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2330101/
Abstract

The caspase-recruitment domain (CARD) is known to play an important role in apoptosis and inflammation as an essential protein-protein interaction domain. The CARD of the cytosolic pathogen receptor Nod1 was overexpressed in Escherichia coli and purified by affinity chromatography and gel filtration. The purified CARD was crystallized at 277 K using the microseeding method. X-ray diffraction data were collected to 1.9 A resolution. The crystals belong to space group P3(1) or P3(2), with unit-cell parameters a = b = 79.1, c = 80.9 A. Preliminary analysis indicates that there is one dimeric CARD molecule in the asymmetric unit.

摘要

已知半胱天冬酶招募结构域(CARD)作为一种重要的蛋白质-蛋白质相互作用结构域,在细胞凋亡和炎症中发挥重要作用。胞质病原体受体Nod1的CARD在大肠杆菌中过表达,并通过亲和层析和凝胶过滤进行纯化。纯化后的CARD采用微量接种法在277 K下结晶。收集到分辨率为1.9 Å的X射线衍射数据。晶体属于空间群P3(1)或P3(2),晶胞参数a = b = 79.1,c = 80.9 Å。初步分析表明,不对称单位中有一个二聚体CARD分子。

相似文献

1
Purification, crystallization and preliminary crystallographic characterization of the caspase-recruitment domain of human Nod1.人Nod1半胱天冬酶招募结构域的纯化、结晶及初步晶体学表征
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jan 1;63(Pt 1):21-3. doi: 10.1107/S1744309106051955. Epub 2006 Dec 16.
2
Crystal structure of the Nod1 caspase activation and recruitment domain.Nod1半胱天冬酶激活与募集结构域的晶体结构。
Biochem Biophys Res Commun. 2007 Feb 2;353(1):1-5. doi: 10.1016/j.bbrc.2006.11.122. Epub 2006 Dec 6.
3
Monomer/dimer transition of the caspase-recruitment domain of human Nod1.人Nod1半胱天冬酶招募结构域的单体/二聚体转变
Biochemistry. 2008 Feb 5;47(5):1319-25. doi: 10.1021/bi7016602. Epub 2008 Jan 11.
4
Purification, crystallization and preliminary x-ray crystallographic studies of RAIDD Death-Domain (DD).RAIDD 死亡结构域(DD)的纯化、结晶和初步 X 射线晶体学研究。
Int J Mol Sci. 2009 Jun 3;10(6):2501-2509. doi: 10.3390/ijms10062501.
5
Crystallization and preliminary X-ray crystallographic analysis of the CARD domain of apoptosis repressor with CARD (ARC).含CARD结构域的凋亡抑制蛋白(ARC)的CARD结构域的结晶及初步X射线晶体学分析
Acta Crystallogr F Struct Biol Commun. 2015 Jan 1;71(Pt 1):82-5. doi: 10.1107/S2053230X14026211.
6
Crystallization and preliminary X-ray crystallographic studies of the CARD domain of human CARMA1.人CARMA1的CARD结构域的结晶及初步X射线晶体学研究。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Apr 1;69(Pt 4):435-7. doi: 10.1107/S1744309113005642. Epub 2013 Mar 28.
7
Crystallization and preliminary X-ray crystallographic studies of the oligomeric death-domain complex between PIDD and RAIDD.PIDD与RAIDD之间寡聚死亡结构域复合物的结晶及初步X射线晶体学研究。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Mar 1;63(Pt 3):229-32. doi: 10.1107/S1744309107007889. Epub 2007 Feb 23.
8
Structural and functional insights into CARDs of zebrafish (Danio rerio) NOD1 and NOD2, and their interaction with adaptor protein RIP2.斑马鱼(Danio rerio)NOD1和NOD2的CARD结构与功能解析,以及它们与衔接蛋白RIP2的相互作用
Mol Biosyst. 2015 Aug;11(8):2324-36. doi: 10.1039/c5mb00212e.
9
Solution structure of NOD1 CARD and mutational analysis of its interaction with the CARD of downstream kinase RICK.NOD1 CARD的溶液结构及其与下游激酶RICK的CARD相互作用的突变分析
J Mol Biol. 2007 Jan 5;365(1):160-74. doi: 10.1016/j.jmb.2006.09.067. Epub 2006 Sep 29.
10
Cloning, purification, crystallization and preliminary crystallographic analysis of acylphosphatase from Pyrococcus horikoshii OT3.嗜热栖热菌OT3酰基磷酸酶的克隆、纯化、结晶及初步晶体学分析
Acta Crystallogr D Biol Crystallogr. 2004 Jun;60(Pt 6):1135-6. doi: 10.1107/S0907444904007735. Epub 2004 May 21.

引用本文的文献

1
Roles of EvpP in Macrophage Interactions.EvpP 在巨噬细胞相互作用中的作用。
Front Cell Infect Microbiol. 2020 Feb 14;10:53. doi: 10.3389/fcimb.2020.00053. eCollection 2020.
2
Structural and functional analysis of the NLRP4 pyrin domain.NLRP4 吡喃结构域的结构与功能分析。
Biochemistry. 2012 Sep 18;51(37):7330-41. doi: 10.1021/bi3007059. Epub 2012 Sep 6.
3
Expression, purification, and characterization of recombinant NOD1 (NLRC1): A NLR family member.重组 NOD1(NLRC1):NLR 家族成员的表达、纯化和特性分析。
J Biotechnol. 2012 Jan;157(1):75-81. doi: 10.1016/j.jbiotec.2011.10.007. Epub 2011 Oct 28.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Solution structure of NOD1 CARD and mutational analysis of its interaction with the CARD of downstream kinase RICK.NOD1 CARD的溶液结构及其与下游激酶RICK的CARD相互作用的突变分析
J Mol Biol. 2007 Jan 5;365(1):160-74. doi: 10.1016/j.jmb.2006.09.067. Epub 2006 Sep 29.
3
Association between a complex insertion/deletion polymorphism in NOD1 (CARD4) and susceptibility to inflammatory bowel disease.NOD1(CARD4)基因中一种复杂的插入/缺失多态性与炎症性肠病易感性之间的关联。
Hum Mol Genet. 2005 May 15;14(10):1245-50. doi: 10.1093/hmg/ddi135. Epub 2005 Mar 24.
4
NOD1 variation, immunoglobulin E and asthma.NOD1变异、免疫球蛋白E与哮喘。
Hum Mol Genet. 2005 Apr 1;14(7):935-41. doi: 10.1093/hmg/ddi087. Epub 2005 Feb 17.
5
Nod1 responds to peptidoglycan delivered by the Helicobacter pylori cag pathogenicity island.Nod1对幽门螺杆菌cag致病岛传递的肽聚糖产生反应。
Nat Immunol. 2004 Nov;5(11):1166-74. doi: 10.1038/ni1131. Epub 2004 Oct 17.
6
Nod1 detects a unique muropeptide from gram-negative bacterial peptidoglycan.Nod1可检测到来自革兰氏阴性菌肽聚糖的一种独特的胞壁肽。
Science. 2003 Jun 6;300(5625):1584-7. doi: 10.1126/science.1084677.
7
Nod1, a CARD protein, enhances pro-interleukin-1beta processing through the interaction with pro-caspase-1.Nod1是一种含半胱天冬酶激活和募集结构域(CARD)的蛋白质,它通过与前半胱天冬酶-1相互作用来增强白细胞介素-1β前体的加工过程。
Biochem Biophys Res Commun. 2002 Dec 13;299(4):652-8. doi: 10.1016/s0006-291x(02)02714-6.
8
The death domain superfamily: a tale of two interfaces?死亡结构域超家族:两个界面的故事?
Trends Biochem Sci. 2001 Aug;26(8):475-81. doi: 10.1016/s0968-0004(01)01905-3.
9
ICEBERG: a novel inhibitor of interleukin-1beta generation.ICEBERG:一种新型白细胞介素-1β生成抑制剂。
Cell. 2000 Sep 29;103(1):99-111. doi: 10.1016/s0092-8674(00)00108-2.
10
An induced proximity model for NF-kappa B activation in the Nod1/RICK and RIP signaling pathways.Nod1/RICK和RIP信号通路中NF-κB激活的诱导性接近模型
J Biol Chem. 2000 Sep 8;275(36):27823-31. doi: 10.1074/jbc.M003415200.