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组氨酸64的互变异构与碳酸酐酶催化中的质子转移相关。

Tautomerism of histidine 64 associated with proton transfer in catalysis of carbonic anhydrase.

作者信息

Shimahara Hideto, Yoshida Takuya, Shibata Yasutaka, Shimizu Masato, Kyogoku Yoshimasa, Sakiyama Fumio, Nakazawa Takashi, Tate Shin-Ichi, Ohki Shin-Ya, Kato Takeshi, Moriyama Hozumi, Kishida Ken-Ichi, Tano Yasuo, Ohkubo Tadayasu, Kobayashi Yuji

机构信息

Center for Nano Materials and Technology, Japan Advanced Institute of Science and Technology, Nomi, Ishikawa 923-1211; Graduate School of Pharmaceutical Sciences, Osaka University, Suita, Osaka 565-0871; Institute for Protein Research, Osaka University, Suita, Osaka 565-0871; Osaka University of Pharmaceutical Sciences, Takatsuki, Osaka 569-1094, Japan.

Graduate School of Pharmaceutical Sciences, Osaka University, Suita, Osaka 565-0871.

出版信息

J Biol Chem. 2007 Mar 30;282(13):9646-9656. doi: 10.1074/jbc.M609679200. Epub 2007 Jan 3.

DOI:10.1074/jbc.M609679200
PMID:17202139
Abstract

The imidazole (15)N signals of histidine 64 (His(64)), involved in the catalytic function of human carbonic anhydrase II (hCAII), were assigned unambiguously. This was accomplished by incorporating the labeled histidine as probes for solution NMR analysis, with (15)N at ring-N(delta1) and N(epsilon2), (13)Cat ring-Cepsilon1, (13)C and (15)N at all carbon and nitrogen, or (15)N at the amide nitrogen and the labeled glycine with (13)C at the carbonyl carbon. Using the pH dependence of ring-(15)N signals and a comparison between experimental and simulated curves, we determined that the tautomeric equilibrium constant (K(T)) of His(64) is 1.0, which differs from that of other histidine residues. This unique value characterizes the imidazole nitrogen atoms of His(64) as both a general acid (a) and base (b): its epsilon2-nitrogen as (a) releases one proton into the bulk, whereas its delta1-nitrogen as (b) extracts another proton from a water molecule within the water bridge coupling to the zinc-bound water inside the cave. This accelerates the generation of zinc-bound hydroxide to react with the carbon dioxide. Releasing the productive bicarbonate ion from the inside separates the water bridge pathway, in which the next water molecules move into beside zinc ion. A new water molecule is supplied from the bulk to near the delta1-nitrogen of His(64). These reconstitute the water bridge. Based on these features, we suggest here a catalytic mechanism for hCAII: the tautomerization of His(64) can mediate the transfers of both protons and water molecules at a neutral pH with high efficiency, requiring no time- or energy-consuming processes.

摘要

参与人碳酸酐酶II(hCAII)催化功能的组氨酸64(His(64))的咪唑(15)N信号已被明确归属。这是通过将标记的组氨酸作为溶液核磁共振分析的探针来实现的,标记的组氨酸在环N(δ1)和N(ε2)处含有(15)N,在环Cε1处含有(13)C,所有碳和氮处均含有(13)C和(15)N,或者在酰胺氮处含有(15)N,以及在羰基碳处含有(13)C的标记甘氨酸。利用环(15)N信号的pH依赖性以及实验曲线与模拟曲线的比较,我们确定His(64)的互变异构平衡常数(K(T))为1.0,这与其他组氨酸残基的不同。这个独特的值将His(64)的咪唑氮原子表征为既是广义酸(a)又是广义碱(b):其ε2-氮作为(a)向主体释放一个质子,而其δ1-氮作为(b)从与洞穴内锌结合水耦合的水桥中的水分子中提取另一个质子。这加速了锌结合氢氧化物与二氧化碳反应的生成。从内部释放出有活性的碳酸氢根离子会分离水桥路径,接下来的水分子会移动到锌离子旁边。一个新的水分子从主体供应到His(64)的δ1-氮附近。这些重新构成了水桥。基于这些特征,我们在此提出hCAII的催化机制:His(64)的互变异构可以在中性pH下高效介导质子和水分子的转移,无需耗时或耗能的过程。

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