Fraser Christophe, Hanage William P, Spratt Brian G
Department of Infectious Disease Epidemiology, Imperial College London, London W2 1PG, UK.
Science. 2007 Jan 26;315(5811):476-80. doi: 10.1126/science.1127573.
Genetic surveys reveal the diversity of bacteria and lead to the questioning of species concepts used to categorize bacteria. One difficulty in defining bacterial species arises from the high rates of recombination that results in the transfer of DNA between relatively distantly related bacteria. Barriers to this process, which could be used to define species naturally, are not apparent. Here, we review conceptual models of bacterial speciation and describe our computer simulations of speciation. Our findings suggest that the rate of recombination and its relation to genetic divergence have a strong influence on outcomes. We propose that a distinction be made between clonal divergence and sexual speciation. Hence, to make sense of bacterial diversity, we need data not only from genetic surveys but also from experimental determination of selection pressures and recombination rates and from theoretical models.
基因调查揭示了细菌的多样性,并引发了对用于对细菌进行分类的物种概念的质疑。定义细菌物种的一个困难在于重组率很高,这导致DNA在亲缘关系相对较远的细菌之间转移。可用于自然定义物种的这一过程的障碍并不明显。在这里,我们回顾了细菌物种形成的概念模型,并描述了我们对物种形成的计算机模拟。我们的研究结果表明,重组率及其与遗传差异的关系对结果有很大影响。我们建议区分克隆分化和有性物种形成。因此,为了理解细菌的多样性,我们不仅需要基因调查的数据,还需要选择压力和重组率的实验测定数据以及理论模型的数据。