Di Maro Antimo, Chambery Angela, Daniele Addolorata, Casoria Paolo, Parente Augusto
Dipartimento di Scienze della Vita, Seconda Università di Napoli, Via Vivaldi 43, I-81100 Caserta, Italy.
Phytochemistry. 2007 Mar;68(6):767-76. doi: 10.1016/j.phytochem.2006.12.002. Epub 2007 Jan 26.
Leaves from Phytolacca heterotepala H. Walter (Mexican pokeweed) contain at least 10 type 1 RIP isoforms, named heterotepalins. Their Mr values are included in the range 28,000-36,000, as shown by SDS-PAGE performed under reduced conditions and the pI values in the pH range 8.50-9.50. Some heterotepalins are glycosylated. ESI-QTOF mass spectrometry provides the accurate Mr of heterotepalin 4 (29,326.00) and heterotepalin 5b (30,477.00), two isoforms purified to homogeneity by conventional chromatographic techniques. The N-terminal sequences up to residue 35, show that heterotepalins exhibit an high percentage identity with other type 1 RIPs isolated from Phytolaccaceae. Some heterotepalins cross-react with antisera raised against RIPs isolated from Phytolacca dioica leaves. The complete amino acid sequence of heterotepalin 4 matches that of Phytolacca heterotepala anti-viral protein PAP (RIP1), deduced from the cDNA sequence of PhRIP1 gene (AC: AY327475), with one exception concerning residue 245 which, in the native protein, is Ile instead of Met. This substitution, found by mass spectrometry mapping, has been directly confirmed by Edman degradation sequencing of the C-terminal tryptic peptide 242-262. The results show the high potential of mass spectrometry and Edman degradation to verify and to uncover possible amino acid substitutions between native proteins and their cDNA deduced sequences.
异序商陆(Phytolacca heterotepala H. Walter)(墨西哥商陆)的叶子中至少含有10种1型核糖体失活蛋白(RIP)同工型,称为异序商陆蛋白。如在还原条件下进行的SDS-PAGE所示,它们的相对分子质量(Mr)值在28,000 - 36,000范围内,且其等电点(pI)值在pH 8.50 - 9.50范围内。一些异序商陆蛋白是糖基化的。电喷雾四极杆飞行时间质谱(ESI-QTOF)测定了通过传统色谱技术纯化至均一的两种同工型异序商陆蛋白4(29,326.00)和异序商陆蛋白5b(30,477.00)的精确Mr。直至第35位残基的N端序列表明,异序商陆蛋白与从商陆科分离出的其他1型RIP具有高度的同一性。一些异序商陆蛋白能与针对从垂序商陆叶子中分离出的RIP产生的抗血清发生交叉反应。异序商陆蛋白4的完整氨基酸序列与从PhRIP1基因(登录号:AY327475)的cDNA序列推导的异序商陆抗病毒蛋白PAP(RIP1)的序列匹配,唯一的例外是第245位残基,在天然蛋白中是异亮氨酸(Ile)而非甲硫氨酸(Met)。通过质谱图谱发现的这种取代,已通过对C端胰蛋白酶肽段242 - 262的埃德曼降解测序得到直接证实。结果表明,质谱和埃德曼降解在验证和揭示天然蛋白与其cDNA推导序列之间可能存在的氨基酸取代方面具有很高潜力。