Nicol Graeme W, Campbell Colin D, Chapman Stephen J, Prosser James I
School of Biological Sciences, University of Aberdeen, St Machar Drive, Aberdeen, UK.
FEMS Microbiol Ecol. 2007 Apr;60(1):51-9. doi: 10.1111/j.1574-6941.2006.00258.x. Epub 2007 Jan 30.
Group 1 Crenarchaeota are an abundant component of soil microbial communities. A number of distinct lineages have been discovered, and the Group 1.1b lineage is present in most soil types. Others, such as the Group 1.1c lineage, may be restricted to specific soil types, such as acidic forest soils. To determine the effects of afforestation on the Archaea of moorland soils, archaeal community structure was examined across three parallel 180 m transects, running from open heather moorland into a Scots pine forest. Communities were characterized using a combination of cloning and denaturing gradient gel electrophoresis (DGGE) analysis of 16S rRNA reverse transcriptase-polymerase chain reaction products. Although forest soils selected for a reproducibly distinct crenarchaeal community structure from moorland soils, both habitats contained similar populations, indicated by comigrating DGGE bands. Archaeal communities in soils of both ecosystems were dominated by Group 1.1c crenarchaea, and reproducible differences in community structure within this lineage were observed between forest and moorland soils. The findings indicate that the afforestation of moorland soils can lead to changes in crenarchaeal community structure with a potential impact on ecosystem function.
第一组泉古菌是土壤微生物群落的重要组成部分。已经发现了许多不同的谱系,并且1.1b谱系存在于大多数土壤类型中。其他谱系,如1.1c谱系,可能仅限于特定的土壤类型,如酸性森林土壤。为了确定造林对泥炭地土壤古菌的影响,在从开阔的石南荒原到苏格兰松树林的三个平行的180米样带中研究了古菌群落结构。使用对16S rRNA逆转录酶-聚合酶链反应产物进行克隆和变性梯度凝胶电泳(DGGE)分析相结合的方法对群落进行了表征。尽管从泥炭地土壤中选择的森林土壤具有可重复的独特泉古菌群落结构,但通过DGGE条带共迁移表明,这两种生境都含有相似的种群。两个生态系统土壤中的古菌群落均以1.1c泉古菌为主,并且在森林土壤和泥炭地土壤之间观察到该谱系内群落结构的可重复差异。研究结果表明,泥炭地土壤造林可导致泉古菌群落结构发生变化,对生态系统功能产生潜在影响。