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深海栖热芽孢杆菌新种,一种从深海热液喷口分离出的嗜热产乳酸细菌。

Exiguobacterium profundum sp. nov., a moderately thermophilic, lactic acid-producing bacterium isolated from a deep-sea hydrothermal vent.

作者信息

Crapart Sylvaine, Fardeau Marie-Laure, Cayol Jean-Luc, Thomas Pierre, Sery Christian, Ollivier Bernard, Combet-Blanc Yannick

机构信息

IRD, UMR180, IFR-BAIM, Universités de Provence et de la Méditerranée, ESIL case 925, 163 Avenue de Luminy, 13288 Marseille Cedex 9, France.

出版信息

Int J Syst Evol Microbiol. 2007 Feb;57(Pt 2):287-292. doi: 10.1099/ijs.0.64639-0.

Abstract

A facultatively anaerobic, halotolerant, moderately thermophilic and non-sporulating bacterium, designated strain 10C(T), was isolated from deep-sea hydrothermal vent samples collected on the 13 degrees N East Pacific Rise at a depth of approximately 2600 m. Cells of strain 10C(T) were Gram-positive, motile rods, and grew optimally at 45 degrees C (range 12-49 degrees C), pH 7.0 (range pH 5.5-9.5) and 0-2 % NaCl (range 0-11 %). (+)-L-Lactate was the main organic acid detected from carbohydrate fermentation with traces of formate, acetate and ethanol. Strain 10C(T) was catalase-positive, oxidase-negative and reduced nitrate to nitrite under anaerobic conditions. The DNA G+C content was 50.4 mol%. Its closest phylogenetic relatives were Exiguobacterium aestuarii TF-16(T) and Exiguobacterium marinum TF-80(T) (16S rRNA gene sequence similarity >99 %). However, strain 10C(T) differed genotypically from these two Exiguobacterium species as indicated by DNA-DNA relatedness data. Therefore, on the basis of phenotypic, genotypic and phylogenetic characteristics, strain 10C(T) is considered to represent a novel species of the genus Exiguobacterium, for which the name Exiguobacterium profundum sp. nov. is proposed. The type strain is 10C(T) (=CCUG 50949(T)=DSM 17289(T)).

摘要

从东太平洋海隆北纬13度约2600米深处采集的深海热液喷口样本中分离出一株兼性厌氧、耐盐、嗜中温且不产芽孢的细菌,命名为菌株10C(T)。菌株10C(T)的细胞为革兰氏阳性、能动杆菌,在45℃(温度范围12 - 49℃)、pH 7.0(pH范围5.5 - 9.5)和0 - 2% NaCl(NaCl范围0 - 11%)条件下生长最佳。(+)-L-乳酸是碳水化合物发酵检测到的主要有机酸,伴有微量甲酸、乙酸和乙醇。菌株10C(T)过氧化氢酶阳性、氧化酶阴性,在厌氧条件下可将硝酸盐还原为亚硝酸盐。DNA的G+C含量为50.4 mol%。其最接近的系统发育亲缘种是河口微小杆菌TF-16(T)和海洋微小杆菌TF-80(T)(16S rRNA基因序列相似性>99%)。然而,DNA-DNA相关性数据表明,菌株10C(T)在基因型上与这两个微小杆菌属物种不同。因此,基于表型、基因型和系统发育特征,菌株10C(T)被认为代表微小杆菌属的一个新物种,为此提出新名称深海微小杆菌(Exiguobacterium profundum sp. nov.)。模式菌株为10C(T)(=CCUG 50949(T)=DSM 17289(T))。

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