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用于生物标志物研究的人类卵巢癌大规模蛋白质组学分析

Large-scale proteomics analysis of human ovarian cancer for biomarkers.

作者信息

Bengtsson Sofia, Krogh Morten, Szigyarto Cristina Al-Khalili, Uhlen Mathias, Schedvins Kjell, Silfverswärd Claes, Linder Stig, Auer Gert, Alaiya Ayodele, James Peter

机构信息

Department of Protein Technology, Lund University, 221 84 Lund, Sweden.

出版信息

J Proteome Res. 2007 Apr;6(4):1440-50. doi: 10.1021/pr060593y. Epub 2007 Feb 22.

DOI:10.1021/pr060593y
PMID:17315909
Abstract

Ovarian cancer is usually found at a late stage when the prognosis is often bad. Relative survival rates decrease with tumor stage or grade, and the 5-year survival rate for women with carcinoma is only 38%. Thus, there is a great need to find biomarkers that can be used to carry out routine screening, especially in high-risk patient groups. Here, we present a large-scale study of 64 tissue samples taken from patients at all stages and show that we can identify statistically valid markers using nonsupervised methods that distinguish between normal, benign, borderline, and malignant tissue. We have identified 217 of the significantly changing protein spots. We are expressing and raising antibodies to 35 of these. Currently, we have validated 5 of these antibodies for use in immunohistochemical analysis using tissue microarrays of healthy and diseased ovarian, as well as other, human tissues.

摘要

卵巢癌通常在晚期才被发现,而晚期的预后往往很差。相对生存率会随着肿瘤分期或分级的增加而降低,患有卵巢癌的女性的5年生存率仅为38%。因此,迫切需要找到可用于进行常规筛查的生物标志物,尤其是在高危患者群体中。在此,我们对从各阶段患者身上采集的64份组织样本进行了大规模研究,结果表明我们可以使用无监督方法识别出具有统计学意义的有效标志物,这些标志物能够区分正常组织、良性组织、交界性组织和恶性组织。我们已经鉴定出217个有显著变化的蛋白质斑点。我们正在对其中35个进行表达并制备抗体。目前,我们已经验证了其中5种抗体可用于使用健康和患病卵巢以及其他人体组织的组织微阵列进行免疫组织化学分析。

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Large-scale proteomics analysis of human ovarian cancer for biomarkers.用于生物标志物研究的人类卵巢癌大规模蛋白质组学分析
J Proteome Res. 2007 Apr;6(4):1440-50. doi: 10.1021/pr060593y. Epub 2007 Feb 22.
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Proteomic tracking of serum protein isoforms as screening biomarkers of ovarian cancer.血清蛋白异构体的蛋白质组学追踪作为卵巢癌的筛查生物标志物
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Application of proteomics in ovarian cancer: which sample should be used?蛋白质组学在卵巢癌中的应用:应使用哪种样本?
Gynecol Oncol. 2009 Dec;115(3):497-503. doi: 10.1016/j.ygyno.2009.09.005. Epub 2009 Oct 6.
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Classifications of ovarian cancer tissues by proteomic patterns.通过蛋白质组学模式对卵巢癌组织进行分类。
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Tumor vascular proteins as biomarkers in ovarian cancer.肿瘤血管蛋白作为卵巢癌的生物标志物
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Proteins' promise--progress and challenges in ovarian cancer proteomics.蛋白质的前景——卵巢癌蛋白质组学的进展与挑战
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A proteome resource of ovarian cancer ascites: integrated proteomic and bioinformatic analyses to identify putative biomarkers.卵巢癌腹水的蛋白质组资源:综合蛋白质组学和生物信息学分析以鉴定潜在生物标志物
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Am J Surg Pathol. 2007 May;31(5):774-82. doi: 10.1097/01.pas.0000213422.53750.d1.
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Preoperative serum tetranectin, CA125 and menopausal status used as single markers in screening and in a risk assessment index (RAI) in discriminating between benign and malignant ovarian tumors.术前血清纤连蛋白、CA125以及绝经状态作为单一标志物用于筛查以及鉴别卵巢良恶性肿瘤的风险评估指数(RAI)中。
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