Shin Sung Bin Y, Yoo Barney, Todaro Louis J, Kirshenbaum Kent
Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003-6688, USA.
J Am Chem Soc. 2007 Mar 21;129(11):3218-25. doi: 10.1021/ja066960o. Epub 2007 Feb 27.
Foldamers are an intriguing family of biomimetic oligomers that exhibit a propensity to adopt stable secondary structures. N-Substituted glycine oligomers, or "peptoids", are a prototypical example of these foldamer systems and are known to form a helix resembling that of polyproline type I. Ongoing studies seek to improve the stability of peptoid folding and to discover new secondary structure motifs. Here, we report that peptoids undergo highly efficient head-to-tail macrocyclization reactions. A diverse array of peptoid sequences from pentamers to 20mers were converted to macrocyclic products within 5 min at room temperature. The introduction of the covalent constraint enhances conformational ordering, allowing for the crystallization of a cyclic peptoid hexamer and octamer. We present the first X-ray crystallographic structures of peptoid hetero-oligomers, revealing that peptoid macrocycles can form a reverse-turn conformation.
折叠体是一类引人入胜的仿生低聚物,它们倾向于形成稳定的二级结构。N-取代甘氨酸低聚物,即“类肽”,是这些折叠体系统的典型例子,已知能形成类似于I型聚脯氨酸的螺旋结构。正在进行的研究旨在提高类肽折叠的稳定性,并发现新的二级结构基序。在此,我们报道类肽能发生高效的头对尾大环化反应。在室温下,从五聚体到二十聚体的各种类肽序列在5分钟内就能转化为大环产物。共价约束的引入增强了构象有序性,使得环状类肽六聚体和八聚体能够结晶。我们展示了类肽杂低聚物的首个X射线晶体结构,揭示了类肽大环可以形成反向转角构象。