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锌指结构域和其他结构域协同作用,使果蝇的sryβ和δ蛋白结合于特定染色体位点。

Zinc fingers and other domains cooperate in binding of Drosophila sry beta and delta proteins at specific chromosomal sites.

作者信息

Noselli S, Payre F, Vincent A

机构信息

Centre de Recherche de Biochimie et de Génétique Cellulaires, Centre National de la Recherche Scientifique, Toulouse, France.

出版信息

Mol Cell Biol. 1992 Feb;12(2):724-33. doi: 10.1128/mcb.12.2.724-733.1992.

DOI:10.1128/mcb.12.2.724-733.1992
PMID:1732741
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC364279/
Abstract

The closely related Drosophila serendipity (sry) beta and delta zinc finger proteins display consensus in vitro DNA recognition sequences differing by 4 of 13 nucleotide positions and bind in vivo to distinct sets of sites on polytene chromosomes. We compared the pattern of in vivo chromosomal binding of deleted forms of the sry delta protein fused to beta-galactosidase and expressed in Drosophila transgenic lines. Results show that the carboxy-terminal DNA-binding finger domain is required and sufficient for binding at specific chromosomal sites but that this binding does not nearly reproduce the wild-type pattern. An NH2-terminal domain of the sry delta protein is essential to its specificity of in vivo interaction with chromatin. In vitro and in vivo experiments using reciprocal finger swap between the sry beta and delta proteins suggest that the in vivo specificity is dependent on selective protein-protein contacts at defined chromosomal sites, in addition to DNA specific recognition.

摘要

密切相关的果蝇意外(sry)β和δ锌指蛋白在体外DNA识别序列上具有一致性,13个核苷酸位置中有4个不同,并且在体内与多线染色体上不同的位点集合结合。我们比较了与β-半乳糖苷酶融合并在果蝇转基因系中表达的sryδ蛋白缺失形式的体内染色体结合模式。结果表明,羧基末端DNA结合指结构域对于在特定染色体位点结合是必需的且足够的,但这种结合几乎不能重现野生型模式。sryδ蛋白的NH2末端结构域对其与染色质体内相互作用的特异性至关重要。使用sryβ和δ蛋白之间的相互指交换进行的体外和体内实验表明,除了DNA特异性识别外,体内特异性还取决于在特定染色体位点的选择性蛋白质-蛋白质接触。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/213247877cb9/molcellb00026-0308-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/d62631bed3b6/molcellb00026-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/58fe9df6d312/molcellb00026-0307-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/213247877cb9/molcellb00026-0308-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/d62631bed3b6/molcellb00026-0305-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/58fe9df6d312/molcellb00026-0307-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5841/364279/213247877cb9/molcellb00026-0308-a.jpg

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1
Zinc fingers and other domains cooperate in binding of Drosophila sry beta and delta proteins at specific chromosomal sites.锌指结构域和其他结构域协同作用,使果蝇的sryβ和δ蛋白结合于特定染色体位点。
Mol Cell Biol. 1992 Feb;12(2):724-33. doi: 10.1128/mcb.12.2.724-733.1992.
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引用本文的文献

1
Two types of zinc fingers are required for dimerization of the serendipity delta transcriptional activator.意外δ转录激活因子二聚化需要两种类型的锌指。
Mol Cell Biol. 1997 Jun;17(6):3137-45. doi: 10.1128/MCB.17.6.3137.
2
Interspecific comparison of Drosophila serendipity delta and beta: multimodular structure of these C2H2 zinc finger proteins.果蝇意外蛋白δ和β的种间比较:这些C2H2锌指蛋白的多模块结构
J Mol Evol. 1994 Mar;38(3):263-73. doi: 10.1007/BF00176088.

本文引用的文献

1
Differential distribution of RNA polymerase B and nonhistone chromosomal proteins in polytene chromosomes of Drosophila melanogaster.RNA聚合酶B和非组蛋白染色体蛋白在黑腹果蝇多线染色体中的差异分布。
EMBO J. 1983;2(3):395-402. doi: 10.1002/j.1460-2075.1983.tb01436.x.
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Vectors for P element-mediated gene transfer in Drosophila.用于果蝇中P因子介导的基因转移的载体。
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Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes.
非洲爪蟾卵母细胞中蛋白质转录因子IIIA的重复锌结合结构域。
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4
Sequence and structure of the serendipity locus of Drosophila melanogaster. A densely transcribed region including a blastoderm-specific gene.黑腹果蝇意外基因座的序列与结构。一个包含胚盘特异性基因的高度转录区域。
J Mol Biol. 1985 Nov 5;186(1):149-66. doi: 10.1016/0022-2836(85)90265-7.
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Isolation of cDNA encoding transcription factor Sp1 and functional analysis of the DNA binding domain.编码转录因子Sp1的cDNA的分离及DNA结合结构域的功能分析。
Cell. 1987 Dec 24;51(6):1079-90. doi: 10.1016/0092-8674(87)90594-0.
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Finger proteins and DNA-specific recognition: distinct patterns of conserved amino acids suggest different evolutionary modes.手指蛋白与DNA特异性识别:保守氨基酸的不同模式暗示不同的进化模式。
FEBS Lett. 1988 Jul 18;234(2):245-50. doi: 10.1016/0014-5793(88)80091-7.
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Zinc fingers: gilt by association.锌指蛋白:因关联而受青睐。
Cell. 1988 Jan 15;52(1):1-3. doi: 10.1016/0092-8674(88)90522-3.
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Two zinc fingers of a yeast regulatory protein shown by genetic evidence to be essential for its function.酵母调节蛋白的两个锌指结构,遗传学证据表明其对该蛋白功能至关重要。
Nature. 1987;328(6129):443-5. doi: 10.1038/328443a0.
9
Blastoderm-specific and read-through transcription of the sry alpha gene transformed into the Drosophila genome.转化到果蝇基因组中的sry alpha基因的胚盘特异性转录和通读转录。
Dev Biol. 1986 Dec;118(2):480-7. doi: 10.1016/0012-1606(86)90019-9.
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Spatial and temporal pattern of hsp26 expression during normal development.正常发育过程中hsp26表达的时空模式。
EMBO J. 1986 Apr;5(4):747-54. doi: 10.1002/j.1460-2075.1986.tb04277.x.