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手指蛋白与DNA特异性识别:保守氨基酸的不同模式暗示不同的进化模式。

Finger proteins and DNA-specific recognition: distinct patterns of conserved amino acids suggest different evolutionary modes.

作者信息

Payre F, Vincent A

机构信息

Centre de Recherche de Biochimie et Génétique Cellulaires du CNRS, Toulouse, France.

出版信息

FEBS Lett. 1988 Jul 18;234(2):245-50. doi: 10.1016/0014-5793(88)80091-7.

DOI:10.1016/0014-5793(88)80091-7
PMID:3292287
Abstract

Finger proteins, the first example of which was Xenopus TFIIIA, share Zn2+ finger-like folded domains capable of binding to nucleic acids. A large number of this type of protein have been characterised from diverse organisms, indicating a wide evolutionary spread of the DNA-binding fingers. At least two classes of finger proteins may be distinguished. Class I proteins contain variable numbers of the tandemly repeating TFIIIA-like finger motif, (Y/F-X-C-X2-4-C-X3-F-X5-L-X2-H-X3-H). Class II finger proteins display a single (C-X2-C-X13-C-X2-C) motif and a facultative second putative finger. The relation between the structure of finger proteins and their recognised DNA sequences is discussed.

摘要

手指蛋白的首个例子是非洲爪蟾的TFIIIA,它具有能够与核酸结合的锌指样折叠结构域。已从多种生物体中鉴定出大量此类蛋白质,这表明DNA结合指在进化上分布广泛。至少可以区分出两类手指蛋白。I类蛋白含有数量可变的串联重复TFIIIA样指基序(Y/F-X-C-X2-4-C-X3-F-X5-L-X2-H-X3-H)。II类手指蛋白呈现单个(C-X2-C-X13-C-X2-C)基序和一个兼性的第二个推定指。本文讨论了手指蛋白的结构与其识别的DNA序列之间的关系。

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1
Finger proteins and DNA-specific recognition: distinct patterns of conserved amino acids suggest different evolutionary modes.手指蛋白与DNA特异性识别:保守氨基酸的不同模式暗示不同的进化模式。
FEBS Lett. 1988 Jul 18;234(2):245-50. doi: 10.1016/0014-5793(88)80091-7.
2
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引用本文的文献

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Interspecific comparison of Drosophila serendipity delta and beta: multimodular structure of these C2H2 zinc finger proteins.果蝇意外蛋白δ和β的种间比较:这些C2H2锌指蛋白的多模块结构
J Mol Evol. 1994 Mar;38(3):263-73. doi: 10.1007/BF00176088.
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sry h-1,一个新的黑腹果蝇多指蛋白基因,呈现母体和合子表达。
Mol Cell Biol. 1988 Oct;8(10):4459-68. doi: 10.1128/mcb.8.10.4459-4468.1988.
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Coronavirus genome: prediction of putative functional domains in the non-structural polyprotein by comparative amino acid sequence analysis.冠状病毒基因组:通过比较氨基酸序列分析预测非结构多聚蛋白中的推定功能域。
Nucleic Acids Res. 1989 Jun 26;17(12):4847-61. doi: 10.1093/nar/17.12.4847.
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Genomic targets of the serendipity beta and delta zinc finger proteins and their respective DNA recognition sites.意外β和δ锌指蛋白的基因组靶点及其各自的DNA识别位点。
EMBO J. 1991 Sep;10(9):2533-41. doi: 10.1002/j.1460-2075.1991.tb07793.x.
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Zinc fingers and other domains cooperate in binding of Drosophila sry beta and delta proteins at specific chromosomal sites.锌指结构域和其他结构域协同作用,使果蝇的sryβ和δ蛋白结合于特定染色体位点。
Mol Cell Biol. 1992 Feb;12(2):724-33. doi: 10.1128/mcb.12.2.724-733.1992.
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