• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

氢键辅助下苯酚-水阳离子团簇红外光谱的极大展宽:一项从头算混合量子-经典研究

Hydrogen-bond assisted enormous broadening of infrared spectra of phenol-water cationic cluster: an ab initio mixed quantum-classical study.

作者信息

Yamashita Takefumi, Takatsuka Kazuo

机构信息

Department of Basic Science, Graduate School of Arts and Sciences, University of Tokyo, Komaba, Tokyo 153-8902, Japan.

出版信息

J Chem Phys. 2007 Feb 21;126(7):074304. doi: 10.1063/1.2434778.

DOI:10.1063/1.2434778
PMID:17328602
Abstract

The infrared spectrum of phenol-water cationic cluster, [PhOH.H2O]+, taken by Sawamura et al. [J. Phys. Chem. 100, 8131 (1996)] is puzzling in that the peak due to the stretching mode of the phenolic OH (3657 cm-1 for a neutral monomer and 3524 cm-1 for PhOH.H2O) seemingly disappears and instead an extremely broad tail extending down to 2900 cm-1 is observed. The present authors theoretically ascribe this anomalous spectrum to an inhomogeneous broadening of the OH stretching peak caused by the hydrogen bond, the strength of which has been greatly enhanced by ionization of the phenyl ring. Indeed they estimate that the peak position is at 2300 cm-1 and the spectral width can become as wide as 1000 cm-1 at the cluster energy of 32 kcal/mol. This surprisingly wide broadening can be generic in hydrogen-bond systems, which in turn is useful to study the nature of the hydrogen-bond assisted dynamics in various systems such as those in DNA and proteins. To study the present system quantitatively, the authors have developed an ab initio mixed quantum-classical method, in which the nuclear motions on an adiabatic ab initio potential surface are treated such that only the OH stretching motion is described quantum mechanically, while all the other remaining modes are treated classically with on-the-fly scheme. This method includes the implementation of many numerical methodologies, which enables it to deal with a relatively large molecular system. With this theoretical method, the authors analyze the present anomalous broadening in a great detail. In particular, they suggest that one can extract direct information about the hydrogen-bond dynamics with respect to the clear correlation between the vibrational excitation energy of the OH stretching and intermolecular distance by means of a time-resolved infrared spectroscopy: Reflecting the slow and wide-range variation of the intermolecular distance of the relevant hydrogen bond, the time-resolved spectrum is predicted to vary (shift) largely covering the wide range of frequency domain. Thus, it is found that the short-time average along a selected trajectory sensitively reflects the change of the intermolecular distance. The authors also study the effect of internal energy on the hydrogen bonding and the OH spectrum.

摘要

泽村等人[《物理化学杂志》100, 8131 (1996)]测得的苯酚 - 水阳离子簇[PhOH·H₂O]⁺的红外光谱令人费解,因为酚羟基拉伸模式产生的峰(中性单体为3657 cm⁻¹,PhOH·H₂O为3524 cm⁻¹)看似消失了,取而代之的是观察到一个向下延伸至2900 cm⁻¹的极宽的尾部。本文作者从理论上将这种异常光谱归因于氢键导致的OH拉伸峰的非均匀展宽,苯环的电离极大地增强了氢键的强度。实际上,他们估计在簇能量为32 kcal/mol时,峰位置在2300 cm⁻¹,光谱宽度可达1000 cm⁻¹。这种惊人的宽展宽在氢键系统中可能是普遍存在的,这反过来又有助于研究各种系统(如DNA和蛋白质中的系统)中氢键辅助动力学的本质。为了定量研究当前系统,作者开发了一种从头算混合量子 - 经典方法,其中在绝热从头算势能面上处理核运动,使得只有OH拉伸运动用量子力学描述,而所有其他剩余模式用即时方案进行经典处理。该方法包括许多数值方法的实现,这使其能够处理相对较大的分子系统。利用这种理论方法,作者对当前的异常展宽进行了详细分析。特别是,他们认为通过时间分辨红外光谱,可以提取关于OH拉伸振动激发能与分子间距离之间明确相关性的氢键动力学的直接信息:反映相关氢键分子间距离的缓慢和大范围变化,时间分辨光谱预计会在很大的频率域范围内变化(移动)。因此,发现沿着选定轨迹的短时间平均值敏感地反映了分子间距离的变化。作者还研究了内能对氢键和OH光谱的影响。

相似文献

1
Hydrogen-bond assisted enormous broadening of infrared spectra of phenol-water cationic cluster: an ab initio mixed quantum-classical study.氢键辅助下苯酚-水阳离子团簇红外光谱的极大展宽:一项从头算混合量子-经典研究
J Chem Phys. 2007 Feb 21;126(7):074304. doi: 10.1063/1.2434778.
2
Ab initio and DFT studies of the vibrational spectra of hydrogen-bonded PhOH...(H2O)4 complexes.氢键连接的苯酚...(水)4配合物振动光谱的从头算和密度泛函理论研究
Spectrochim Acta A Mol Biomol Spectrosc. 2004 Nov;60(13):3049-57. doi: 10.1016/j.saa.2004.01.026.
3
IR signature of the photoionization-induced hydrophobic-->hydrophilic site switching in phenol-Arn clusters.苯酚 - 氩团簇中光电离诱导的疏水→亲水位点切换的红外特征
J Chem Phys. 2007 Sep 21;127(11):114307. doi: 10.1063/1.2775935.
4
Two-dimensional infrared spectroscopy of intermolecular hydrogen bonds in the condensed phase.凝聚相中介于分子氢键的二维红外光谱学
Acc Chem Res. 2009 Sep 15;42(9):1220-8. doi: 10.1021/ar900006u.
5
Vibrational dynamics of hydrogen-bonded complexes in solutions studied with ultrafast infrared pump-probe spectroscopy.溶液中氢键复合物的超快红外泵浦探针光谱研究中的振动动力学。
Acc Chem Res. 2009 Sep 15;42(9):1259-69. doi: 10.1021/ar9000229.
6
Infrared spectroscopy of phenol-(H2O)(n>10): structural strains in hydrogen bond networks of neutral water clusters.酚-(H2O)(n>10)的红外光谱:中性水分子簇氢键网络中的结构应变。
J Phys Chem A. 2009 Nov 5;113(44):12134-41. doi: 10.1021/jp9061187.
7
Proton dynamics in the strong chelate hydrogen bond of crystalline picolinic acid N-oxide. A new computational approach and infrared, raman and INS study.结晶烟酸N-氧化物强螯合氢键中的质子动力学。一种新的计算方法以及红外、拉曼和非弹性中子散射研究。
J Phys Chem A. 2008 Feb 21;112(7):1576-86. doi: 10.1021/jp077107u. Epub 2008 Jan 29.
8
Structural rearrangements in water viewed through two-dimensional infrared spectroscopy.通过二维红外光谱观察到水中的结构重排。
Acc Chem Res. 2009 Sep 15;42(9):1239-49. doi: 10.1021/ar900088g.
9
Picosecond IR-UV pump-probe spectroscopic study of the dynamics of the vibrational relaxation of jet-cooled phenol. II. Intracluster vibrational energy redistribution of the OH stretching vibration of hydrogen-bonded clusters.喷射冷却苯酚振动弛豫动力学的皮秒红外-紫外泵浦-探测光谱研究。II. 氢键簇OH伸缩振动的簇内振动能量重新分布
J Chem Phys. 2004 Apr 22;120(16):7410-7. doi: 10.1063/1.1668641.
10
Molecular dynamics simulation of nonlinear spectroscopies of intermolecular motions in liquid water.液体水中分子间运动的非线性光谱的分子动力学模拟。
Acc Chem Res. 2009 Sep 15;42(9):1250-8. doi: 10.1021/ar900007s.

引用本文的文献

1
Smart Organic-Inorganic Copolymer Nanoparticles Distinguish Between Microglia and Cancer Cells for Synergistic Immunotherapy in Glioma.智能有机-无机共聚物纳米颗粒可区分小胶质细胞与癌细胞,用于胶质瘤的协同免疫治疗。
Adv Sci (Weinh). 2025 Jul;12(25):e2500882. doi: 10.1002/advs.202500882. Epub 2025 Apr 29.
2
Electrospun Sulfonatocalix[4]arene Loaded Blended Nanofibers: Process Optimization and In Vitro Studies.电纺磺化杯[4]芳烃负载混合纳米纤维:工艺优化与体外研究
Pharmaceutics. 2022 Sep 9;14(9):1912. doi: 10.3390/pharmaceutics14091912.
3
Evaluation of acrylamide-based molecularly imprinted polymer thin-sheets for specific protein capture-a myoglobin model.
基于丙烯酰胺的分子印迹聚合物薄膜对特定蛋白质捕获的评价-以肌红蛋白模型为例。
Biomed Phys Eng Express. 2021 Jun 18;7(4):045025. doi: 10.1088/2057-1976/ac0991.
4
Real-time molecular monitoring of chemical environment in obligate anaerobes during oxygen adaptive response.专性厌氧菌在氧气适应性反应过程中化学环境的实时分子监测
Proc Natl Acad Sci U S A. 2009 Aug 4;106(31):12599-604. doi: 10.1073/pnas.0902070106. Epub 2009 Jun 16.