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极端体重人群的医学测序

Medical sequencing at the extremes of human body mass.

作者信息

Ahituv Nadav, Kavaslar Nihan, Schackwitz Wendy, Ustaszewska Anna, Martin Joel, Hebert Sybil, Doelle Heather, Ersoy Baran, Kryukov Gregory, Schmidt Steffen, Yosef Nir, Ruppin Eytan, Sharan Roded, Vaisse Christian, Sunyaev Shamil, Dent Robert, Cohen Jonathan, McPherson Ruth, Pennacchio Len A

机构信息

Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

出版信息

Am J Hum Genet. 2007 Apr;80(4):779-91. doi: 10.1086/513471. Epub 2007 Mar 5.

Abstract

Body weight is a quantitative trait with significant heritability in humans. To identify potential genetic contributors to this phenotype, we resequenced the coding exons and splice junctions of 58 genes in 379 obese and 378 lean individuals. Our 96-Mb survey included 21 genes associated with monogenic forms of obesity in humans or mice, as well as 37 genes that function in body weight-related pathways. We found that the monogenic obesity-associated gene group was enriched for rare nonsynonymous variants unique to the obese population compared with the lean population. In addition, computational analysis predicted a greater fraction of deleterious variants within the obese cohort. Together, these data suggest that multiple rare alleles contribute to obesity in the population and provide a medical sequencing-based approach to detect them.

摘要

体重是一种在人类中具有显著遗传力的数量性状。为了确定该表型的潜在遗传因素,我们对379名肥胖个体和378名瘦个体的58个基因的编码外显子和剪接位点进行了重测序。我们96兆碱基的调查包括21个与人类或小鼠单基因形式肥胖相关的基因,以及37个在体重相关途径中起作用的基因。我们发现,与瘦人群体相比,单基因肥胖相关基因组在肥胖人群中富含独特的罕见非同义变体。此外,计算分析预测肥胖队列中有害变体的比例更高。这些数据共同表明,多个罕见等位基因导致了人群中的肥胖,并提供了一种基于医学测序的方法来检测它们。

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