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Protein phosphorylation and intermolecular electron transfer: a joint experimental and computational study of a hormone biosynthesis pathway.蛋白质磷酸化与分子间电子转移:激素生物合成途径的联合实验与计算研究
J Am Chem Soc. 2007 Apr 11;129(14):4206-16. doi: 10.1021/ja064803j. Epub 2007 Mar 15.
2
The interaction domain of the redox protein adrenodoxin is mandatory for binding of the electron acceptor CYP11A1, but is not required for binding of the electron donor adrenodoxin reductase.氧化还原蛋白肾上腺皮质铁氧化还原蛋白的相互作用结构域对于电子受体CYP11A1的结合是必需的,但对于电子供体肾上腺皮质铁氧化还原蛋白还原酶的结合则不是必需的。
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3
Phosphorylation of bovine adrenodoxin by protein kinase CK2 affects the interaction with its redox partner cytochrome P450scc (CYP11A1).蛋白激酶CK2对牛肾上腺皮质铁硫蛋白的磷酸化作用会影响其与氧化还原伴侣细胞色素P450scc(CYP11A1)的相互作用。
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4
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Deletions in the loop surrounding the iron-sulfur cluster of adrenodoxin severely affect the interactions with its native redox partners adrenodoxin reductase and cytochrome P450(scc) (CYP11A1).肾上腺皮质铁氧化还原蛋白铁硫簇周围环中的缺失会严重影响其与天然氧化还原伙伴肾上腺皮质铁氧化还原蛋白还原酶和细胞色素P450(scc)(CYP11A1)的相互作用。
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A large-scale comparative analysis of affinity, thermodynamics and functional characteristics of interactions of twelve cytochrome P450 isoforms and their redox partners.十二种细胞色素 P450 同工型及其氧化还原伴侣相互作用的亲和力、热力学和功能特性的大规模比较分析。
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Structure. 1998 Mar 15;6(3):269-80. doi: 10.1016/s0969-2126(98)00031-8.
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Computational, spectroscopic, and resonant mirror biosensor analysis of the interaction of adrenodoxin with native and tryptophan-modified NADPH-adrenodoxin reductase.肾上腺铁氧还蛋白与天然及色氨酸修饰的NADPH-肾上腺铁氧还蛋白还原酶相互作用的计算、光谱和共振镜生物传感器分析。
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Molecular dynamics simulation of truncated bovine adrenodoxin.截短型牛肾上腺皮质铁氧化还原蛋白的分子动力学模拟
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Binding of cytochrome P450 27C1, a retinoid desaturase, to its accessory protein adrenodoxin.细胞色素 P450 27C1(一种视黄醇去饱和酶)与辅助蛋白肾上腺皮质酮的结合。
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Atomic Force Microscopy Study of Protein-Protein Interactions in the Cytochrome CYP11A1 (P450scc)-Containing Steroid Hydroxylase System.含细胞色素CYP11A1(P450scc)的类固醇羟化酶系统中蛋白质-蛋白质相互作用的原子力显微镜研究。
Nanoscale Res Lett. 2011 Dec;6(1):54. doi: 10.1007/s11671-010-9809-5. Epub 2010 Sep 30.
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Brownian dynamics and molecular dynamics study of the association between hydrogenase and ferredoxin from Chlamydomonas reinhardtii.莱茵衣藻氢化酶与铁氧化还原蛋白之间关联的布朗动力学和分子动力学研究
Biophys J. 2008 Oct;95(8):3753-66. doi: 10.1529/biophysj.107.127548. Epub 2008 Jul 11.

本文引用的文献

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All-atom empirical potential for molecular modeling and dynamics studies of proteins.蛋白质分子建模和动力学研究的全原子经验势。
J Phys Chem B. 1998 Apr 30;102(18):3586-616. doi: 10.1021/jp973084f.
2
Coupling coherence distinguishes structure sensitivity in protein electron transfer.耦合相干性区分蛋白质电子转移中的结构敏感性。
Science. 2007 Feb 2;315(5812):622-5. doi: 10.1126/science.1134862.
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The nature of aqueous tunneling pathways between electron-transfer proteins.电子传递蛋白之间水相隧道通路的性质。
Science. 2005 Nov 25;310(5752):1311-3. doi: 10.1126/science.1118316.
4
Phosphorylation of bovine adrenodoxin by protein kinase CK2 affects the interaction with its redox partner cytochrome P450scc (CYP11A1).蛋白激酶CK2对牛肾上腺皮质铁硫蛋白的磷酸化作用会影响其与氧化还原伴侣细胞色素P450scc(CYP11A1)的相互作用。
Biochemistry. 2005 Mar 15;44(10):3821-30. doi: 10.1021/bi047697b.
5
Protein-DNA charge transport: redox activation of a DNA repair protein by guanine radical.蛋白质- DNA电荷转移:鸟嘌呤自由基对DNA修复蛋白的氧化还原激活
Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3546-51. doi: 10.1073/pnas.0409410102. Epub 2005 Feb 28.
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Straightforward detection of the secondary ionisation of the phosphate group and pK determinations by high-resolution solid-state 31P NMR.通过高分辨率固态³¹P核磁共振直接检测磷酸基团的二次电离和pK测定。
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7
Molecular dynamics simulation of truncated bovine adrenodoxin.截短型牛肾上腺皮质铁氧化还原蛋白的分子动力学模拟
Biopolymers. 2005 May;78(1):9-20. doi: 10.1002/bip.20242.
8
Stripping down the mitochondrial cholesterol hydroxylase system, a kinetics study.线粒体胆固醇羟化酶系统的剖析:一项动力学研究
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Electron tunneling through proteins.电子通过蛋白质的隧穿
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10
Dynamic docking and electron-transfer between cytochrome b5 and a suite of myoglobin surface-charge mutants. Introduction of a functional-docking algorithm for protein-protein complexes.细胞色素b5与一组肌红蛋白表面电荷突变体之间的动态对接和电子转移。蛋白质-蛋白质复合物功能对接算法的引入。
J Am Chem Soc. 2004 Mar 10;126(9):2785-98. doi: 10.1021/ja038163l.

蛋白质磷酸化与分子间电子转移:激素生物合成途径的联合实验与计算研究

Protein phosphorylation and intermolecular electron transfer: a joint experimental and computational study of a hormone biosynthesis pathway.

作者信息

Zöllner Andy, Pasquinelli Melissa A, Bernhardt Rita, Beratan David N

机构信息

Universität des Saarlandes, 66123 Saarbrücken, Germany.

出版信息

J Am Chem Soc. 2007 Apr 11;129(14):4206-16. doi: 10.1021/ja064803j. Epub 2007 Mar 15.

DOI:10.1021/ja064803j
PMID:17358057
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3529006/
Abstract

Protein phosphorylation is a common regulator of enzyme activity. Chemical modification of a protein surface, including phosphorylation, could alter the function of biological electron-transfer reactions. However, the sensitivity of intermolecular electron-transfer kinetics to post-translational protein modifications has not been widely investigated. We have therefore combined experimental and computational studies to assess the potential role of phosphorylation in electron-transfer reactions. We investigated the steroid hydroxylating system from bovine adrenal glands, which consists of adrenodoxin (Adx), adrenodoxin reductase (AdR), and a cytochrome P450, CYP11A1. We focused on the phosphorylation of Adx at Thr-71, since this residue is located in the acidic interaction domain of Adx, and a recent study has demonstrated that this residue is phosphorylated by casein kinase 2 (CK2) in vitro.1 Optical biosensor experiments indicate that the presence of this phosphorylation slightly increases the binding affinity of oxidized Adx with CYP11A1ox but not AdRox. This tendency was confirmed by KA values extracted from Adx concentration-dependent stopped-flow experiments that characterize the interaction between AdRred and Adxox or between Adxred and CYP11A1ox. In addition, acceleration of the electron-transfer kinetics measured with stopped-flow is seen only for the phosphorylated Adx-CYP11A1 reaction. Biphasic reaction kinetics are observed only when Adx is phosphorylated at Thr-71, and the Brownian dynamics (BD) simulations suggest that this phosphorylation may enhance the formation of a secondary Adx-CYP11A1 binding complex that provides an additional electron-transfer pathway with enhanced coupling.

摘要

蛋白质磷酸化是酶活性的常见调节方式。蛋白质表面的化学修饰,包括磷酸化,可能会改变生物电子转移反应的功能。然而,分子间电子转移动力学对翻译后蛋白质修饰的敏感性尚未得到广泛研究。因此,我们结合了实验和计算研究,以评估磷酸化在电子转移反应中的潜在作用。我们研究了来自牛肾上腺的类固醇羟化系统,该系统由肾上腺铁氧还蛋白(Adx)、肾上腺铁氧还蛋白还原酶(AdR)和细胞色素P450,CYP11A1组成。我们关注Adx在苏氨酸-71处的磷酸化,因为该残基位于Adx的酸性相互作用结构域中,并且最近的一项研究表明该残基在体外被酪蛋白激酶2(CK2)磷酸化。1光学生物传感器实验表明,这种磷酸化的存在略微增加了氧化型Adx与CYP11A1ox的结合亲和力,但对AdRox没有影响。从Adx浓度依赖性停流实验中提取的KA值证实了这种趋势,这些实验表征了AdRred与Adxox之间或Adxred与CYP11A1ox之间的相互作用。此外,仅在磷酸化的Adx-CYP11A1反应中观察到用停流测量的电子转移动力学加速。仅当Adx在苏氨酸-71处被磷酸化时才观察到双相反应动力学,并且布朗动力学(BD)模拟表明这种磷酸化可能会增强二级Adx-CYP11A1结合复合物的形成,该复合物提供了一条具有增强耦合的额外电子转移途径。