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具有重组和水平基因转移的准种理论相图。

Phase diagrams of quasispecies theory with recombination and horizontal gene transfer.

作者信息

Park J-M, Deem M W

机构信息

Department of Physics & Astronomy and Department of Bioengineering, Rice University, Houston, Texas 77005-1892, USA.

出版信息

Phys Rev Lett. 2007 Feb 2;98(5):058101. doi: 10.1103/PhysRevLett.98.058101. Epub 2007 Jan 29.

Abstract

We consider how transfer of genetic information between individuals influences the phase diagram and mean fitness of both the Eigen and the parallel, or Crow-Kimura, models of evolution. In the absence of genetic transfer, these physical models of evolution consider the replication and point mutation of the genomes of independent individuals in a large population. A phase transition occurs, such that below a critical mutation rate an identifiable quasispecies forms. We show how transfer of genetic information changes the phase diagram and mean fitness and introduces metastability in quasispecies theory, via an analytic field theoretic mapping.

摘要

我们探讨个体间遗传信息的传递如何影响特征值模型以及平行模型(即克劳-木村模型)这两种进化模型的相图和平均适应度。在没有遗传传递的情况下,这些进化的物理模型考虑的是大群体中独立个体基因组的复制和点突变。会发生相变,即低于临界突变率时会形成可识别的准种。我们通过解析场论映射展示了遗传信息的传递如何改变相图和平均适应度,并在准种理论中引入亚稳定性。

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