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人溶菌酶的收敛化学合成与高分辨率X射线结构

Convergent chemical synthesis and high-resolution x-ray structure of human lysozyme.

作者信息

Durek Thomas, Torbeev Vladimir Yu, Kent Stephen B H

机构信息

Institute for Biophysical Dynamics, Department of Biochemistry and Molecular Biology, University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA.

出版信息

Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):4846-51. doi: 10.1073/pnas.0610630104. Epub 2007 Mar 8.

Abstract

In this article, we report the total chemical synthesis of human lysozyme. Lysozyme serves as a widespread model system in various fields of biochemical research, including protein folding, enzyme catalysis, and amyloidogenesis. The 130-aa wild-type polypeptide chain of the human enzyme was assembled from four polypeptide segments by using native chemical ligation in a fully convergent fashion. Key to the assembly strategy is the application of the recently developed kinetically controlled ligation methodology, which provides efficient control over the ligation of two peptide (alpha)thioesters to yield a unique product. This result enables the facile preparation of a 64-residue peptide (alpha)thioester; this segment is joined by native chemical ligation to a 66-aa Cys peptide, to yield the target 130-aa polypeptide chain. The synthetic polypeptide chain was folded in vitro into a defined tertiary structure with concomitant formation of four disulfides, as shown by 2D TOCSY NMR spectroscopy. The structure of the synthetic human lysozyme was confirmed by high-resolution x-ray diffraction, giving the highest-resolution structure (1.04 A) observed to date for this enzyme. Synthetic lysozyme was obtained in good yield and excellent purity and had full enzymatic activity. This facile and efficient convergent synthesis scheme will enable preparation of unique chemical analogs of the lysozyme molecule and will prove useful in numerous areas of lysozyme research in the future.

摘要

在本文中,我们报道了人溶菌酶的全化学合成。溶菌酶在生化研究的各个领域,包括蛋白质折叠、酶催化和淀粉样蛋白生成,都是广泛使用的模型系统。人源酶的130个氨基酸的野生型多肽链通过天然化学连接以完全汇聚的方式由四个多肽片段组装而成。组装策略的关键是应用最近开发的动力学控制连接方法,该方法能有效控制两个肽硫酯的连接以产生单一产物。这一成果使得制备一个64个残基的肽硫酯变得容易;该片段通过天然化学连接与一个66个氨基酸的半胱氨酸肽相连,从而得到目标130个氨基酸的多肽链。如二维全相关谱核磁共振波谱所示,合成的多肽链在体外折叠成确定的三级结构,并同时形成四个二硫键。合成人溶菌酶的结构通过高分辨率X射线衍射得以确认,给出了该酶迄今为止观察到的最高分辨率结构(1.04埃)。合成溶菌酶的产率高、纯度优,且具有完全的酶活性。这种简便高效的汇聚合成方案将能够制备溶菌酶分子独特的化学类似物,并在未来溶菌酶研究的众多领域中证明是有用的。

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