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裂殖酵母U5.U2/U6剪接体复合物的结构表征

Structural characterization of the fission yeast U5.U2/U6 spliceosome complex.

作者信息

Ohi Melanie D, Ren Liping, Wall Joseph S, Gould Kathleen L, Walz Thomas

机构信息

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3195-200. doi: 10.1073/pnas.0611591104. Epub 2007 Feb 20.

DOI:10.1073/pnas.0611591104
PMID:17360628
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1805518/
Abstract

The spliceosome is a dynamic macromolecular machine that catalyzes the excision of introns from pre-mRNA. The megadalton-sized spliceosome is composed of four small nuclear RNPs and additional pre-mRNA splicing factors. The formation of an active spliceosome involves a series of regulated steps that requires the assembly and disassembly of large multiprotein/RNA complexes. The dynamic nature of the pre-mRNA splicing reaction has hampered progress in analyzing the structure of spliceosomal complexes. We have used cryo-electron microscopy to produce a 29-A density map of a stable 37S spliceosomal complex from the genetically tractable fission yeast, Schizosaccharomyces pombe. Containing the U2, U5, and U6 snRNAs, pre-mRNA splicing intermediates, U2 and U5 snRNP proteins, the Nineteen Complex (NTC), and second-step splicing factors, this complex closely resembles in vitro purified mammalian C complex. The density map reveals an asymmetric particle, approximately 30 x 20 x 18 nm in size, which is composed of distinct domains that contact each other at the center of the complex.

摘要

剪接体是一种动态的大分子机器,可催化从前体mRNA中切除内含子。兆道尔顿大小的剪接体由四个小核核糖核蛋白颗粒和其他前体mRNA剪接因子组成。活性剪接体的形成涉及一系列受调控的步骤,这需要大型多蛋白/RNA复合物的组装和拆卸。前体mRNA剪接反应的动态性质阻碍了剪接体复合物结构分析的进展。我们利用冷冻电子显微镜技术,获得了来自遗传背景易于研究的裂殖酵母粟酒裂殖酵母的稳定37S剪接体复合物的29埃密度图。该复合物包含U2、U5和U6小核RNA、前体mRNA剪接中间体、U2和U5小核核糖核蛋白颗粒蛋白、十九复合物(NTC)以及第二步剪接因子,与体外纯化的哺乳动物C复合物极为相似。密度图显示该复合物是一个不对称颗粒,大小约为30×20×18纳米,由在复合物中心相互接触的不同结构域组成。

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本文引用的文献

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Organization of core spliceosomal components U5 snRNA loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as revealed by electron cryomicroscopy.冷冻电子显微镜揭示U4/U6.U5三小分子核糖核蛋白颗粒中核心剪接体成分U5小分子核糖核酸环I和U4/U6双小分子核糖核蛋白颗粒的组织形式
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The SF3b155 N-terminal domain is a scaffold important for splicing.SF3b155 N 端结构域是剪接过程中一个重要的支架。
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Arrested yeast splicing complexes indicate stepwise snRNP recruitment during in vivo spliceosome assembly.停滞的酵母剪接复合体表明体内剪接体组装过程中snRNP的逐步招募。
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Biochemical and NMR analyses of an SF3b155-p14-U2AF-RNA interaction network involved in branch point definition during pre-mRNA splicing.参与前体mRNA剪接过程中分支点定义的SF3b155-p14-U2AF-RNA相互作用网络的生化与核磁共振分析。
RNA. 2006 Mar;12(3):410-25. doi: 10.1261/rna.2271406.
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Crystal structure of a core spliceosomal protein interface.核心剪接体蛋白界面的晶体结构
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Single particle reconstructions of the transferrin-transferrin receptor complex obtained with different specimen preparation techniques.采用不同样本制备技术获得的转铁蛋白-转铁蛋白受体复合物的单颗粒重建。
J Mol Biol. 2006 Feb 3;355(5):1048-65. doi: 10.1016/j.jmb.2005.11.021. Epub 2005 Nov 28.
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Cotranscriptional spliceosome assembly occurs in a stepwise fashion and requires the cap binding complex.共转录剪接体组装以逐步方式发生,并且需要帽结合复合体。
Mol Cell. 2005 Jul 1;19(1):53-63. doi: 10.1016/j.molcel.2005.05.007.
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Noise bias in the refinement of structures derived from single particles.单颗粒衍生结构精修中的噪声偏差
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Three-dimensional structure of the native spliceosome by cryo-electron microscopy.通过冷冻电子显微镜观察到的天然剪接体的三维结构。
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