Cho Kyung-Bin, Moreau Yohann, Kumar Devesh, Rock Dan A, Jones Jeffrey P, Shaik Sason
Department of Organic Chemistry and The Lise Meitner-Minerva Center for Computational Quantum Chemistry, Hebrew University, 91904 Jerusalem, Israel.
Chemistry. 2007;13(14):4103-15. doi: 10.1002/chem.200601704.
The generation of the active species for the enzyme cytochrome P450 by using the highly versatile oxygen surrogate iodosylbenzene (PhIO) often produces different results compared with the native route, in which the active species is generated through O(2) uptake and reduction by NADPH. One of these differences that is addressed here is the deuterium kinetic isotope effect (KIE) jump observed during N-dealkylation of N,N-dimethylaniline (DMA) by P450, when the reaction conditions change from the native to the PhIO route. The paper presents a theoretical analysis targeted to elucidate the mechanism of the reaction of PhIO with heme, to form the high-valent iron-oxo species Compound I (Cpd I), and define the origins of the KIE jump in the reaction of Cpd I with DMA. It is concluded that the likely origin of the KIE jump is the spin-selective chemistry of the enzyme cytochrome P450 under different preparation procedures. In the native route, the reaction proceeds via the doublet spin state of Cpd I and leads to a low KIE value. PhIO, however, diverts the reaction to the quartet spin state of Cpd I, which leads to the observed high KIE values. The KIE jump is reproduced here experimentally for the dealkylation of N,N-dimethyl-4-(methylthio)aniline, by using intra-molecular KIE measurements that avoid kinetic complexities. The effect of PhIO is compared with N,N-dimethylaniline-N-oxide (DMAO), which acts both as the oxygen donor and the substrate and leads to the same KIE values as the native route.
通过使用高度通用的氧替代物亚碘酰苯(PhIO)来生成细胞色素P450酶的活性物种,与天然途径相比,通常会产生不同的结果。在天然途径中,活性物种是通过NADPH摄取和还原O(2)生成的。本文探讨的其中一个差异是,当反应条件从天然途径转变为PhIO途径时,细胞色素P450对N,N-二甲基苯胺(DMA)进行N-脱烷基化反应过程中观察到的氘动力学同位素效应(KIE)跳跃。本文进行了理论分析,旨在阐明PhIO与血红素反应形成高价铁-氧物种化合物I(Cpd I)的反应机制,并确定Cpd I与DMA反应中KIE跳跃的起源。得出的结论是,KIE跳跃的可能起源是细胞色素P450酶在不同制备程序下的自旋选择性化学。在天然途径中,反应通过Cpd I的双重自旋态进行,导致较低的KIE值。然而,PhIO使反应转向Cpd I的四重自旋态,这导致了观察到的较高KIE值。本文通过使用避免动力学复杂性的分子内KIE测量,对N,N-二甲基-4-(甲硫基)苯胺的脱烷基化反应进行了KIE跳跃的实验再现。将PhIO的作用与N,N-二甲基苯胺-N-氧化物(DMAO)进行了比较,DMAO既作为氧供体又作为底物,并且导致与天然途径相同的KIE值。