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具有已知靶点特异性的中草药成分和生物活性植物化合物的植物化学数据库。

Phytochemical databases of Chinese herbal constituents and bioactive plant compounds with known target specificities.

作者信息

Ehrman Thomas M, Barlow David J, Hylands Peter J

机构信息

Pharmaceutical Sciences Research Division and Centre for Natural Medicines Research, King's College London, Franklin-Wilkins Building, 150 Stamford Street, London SE1 9NH, United Kingdom.

出版信息

J Chem Inf Model. 2007 Mar-Apr;47(2):254-63. doi: 10.1021/ci600288m.

Abstract

Two databases have been constructed to facilitate applications of cheminformatics and molecular modeling to medicinal plants. The first contains data on known chemical constituents of 240 commonly used Chinese herbs, the other contains information on target specificities of bioactive plant compounds. Structures are available for all compounds. In the case of the Chinese herbal constituents database, further details include trivial and systematic names, compound class and skeletal type, botanical and Chinese (pinyin) names of associated herb(s), CAS registry number, chirality, pharmacological and toxicological information, and chemical references. For the bioactive plant compounds database, details of molecular target(s), IC50 and related measures, and associated botanical species are given. For Chinese herbs, approximately 7000 unique compounds are listed, though some are found in more than one herb, the total number for all herbs being 8264. For bioactive plant compounds, 2597 compounds active against 78 molecular targets are covered. Statistical relationships within and between the two databases are explored.

摘要

已构建了两个数据库,以促进化学信息学和分子建模在药用植物中的应用。第一个数据库包含240种常用中草药已知化学成分的数据,另一个数据库包含生物活性植物化合物的靶点特异性信息。所有化合物的结构均可用。在中草药成分数据库中,进一步的详细信息包括俗名和系统名称、化合物类别和骨架类型、相关草药的植物学名和中文(拼音)名称、CAS登记号、手性、药理和毒理学信息以及化学参考文献。对于生物活性植物化合物数据库,给出了分子靶点的详细信息、IC50及相关指标以及相关植物物种。对于中草药,列出了约7000种独特的化合物,尽管有些化合物存在于多种草药中,所有草药的化合物总数为8264种。对于生物活性植物化合物,涵盖了对78个分子靶点有活性的2597种化合物。还探索了两个数据库内部和之间的统计关系。

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