Whitehead Timothy A, Boonyaratanakornkit Boonchai B, Höllrigl Volker, Clark Douglas S
Department of Chemical Engineering, University of California, Berkeley, Berkeley, California 94720, USA.
Protein Sci. 2007 Apr;16(4):626-34. doi: 10.1110/ps.062599907.
Prefoldin is a molecular chaperone found in the domains eukarya and archaea that acts in conjunction with Group II chaperonin to correctly fold other nascent proteins. Previously, our group identified a putative single subunit of prefoldin, gamma PFD, that was up-regulated in response to heat stress in the hyperthermophilic archaeon Methanocaldococcus jannaschii. In order to characterize this protein, we subcloned and expressed it and the other two prefoldin subunits from M. jannaschii, alpha and beta PFD, into Eschericia coli and characterized the proteins. Whereas alpha and beta PFD readily assembled into the expected hexamer, gamma PFD would not assemble with either protein. Instead, gamma PFD forms long filaments of defined dimensions measuring 8.5 nm x 1.7-3.5 nm and lengths exceeding 1 microm. Filamentous gamma PFD acts as a molecular chaperone through in vitro assays, in a manner comparable to PFD. A possible molecular model for filament assembly is discussed.
前折叠蛋白是一种存在于真核生物域和古细菌域中的分子伴侣,它与Ⅱ型伴侣蛋白协同作用,使其他新生蛋白质正确折叠。此前,我们小组鉴定出一种假定的前折叠蛋白单亚基γ-PFD,在嗜热古菌詹氏甲烷球菌中,它在热应激反应中上调。为了表征这种蛋白质,我们将其以及詹氏甲烷球菌的其他两个前折叠蛋白亚基α和β-PFD进行亚克隆并在大肠杆菌中表达,然后对这些蛋白质进行表征。α和β-PFD很容易组装成预期的六聚体,而γ-PFD则不会与任何一种蛋白质组装。相反,γ-PFD形成尺寸确定的长丝,长8.5纳米×1.7 - 3.5纳米,长度超过1微米。通过体外实验,丝状γ-PFD作为分子伴侣发挥作用,其方式与前折叠蛋白类似。文中还讨论了丝状组装的一种可能分子模型。