Liao Rong-Zhen, Ding Wan-Jian, Yu Jian-Guo, Fang Wei-Hai, Liu Ruo-Zhuang
College of Chemistry, Beijing Normal University, Beijing 100875, People's Republic of China.
J Phys Chem A. 2007 Apr 26;111(16):3184-90. doi: 10.1021/jp070130v. Epub 2007 Mar 30.
A computational study on the transamination reaction of molecular complexes that consist of NH2CH2COOH + CH2O + nH2O, where n = 0, 1, 2, is presented. This work has allowed the description of the geometries of all the intermediates and transition states of the reactions, which can be described by five steps: carbinolamine formation, dehydration, 1,3 proton transfer, hydrolysis, and carbinolamine elimination. Among the five steps of the reaction, hydrolysis and elimination occur with the existence of general acid catalysis related to the carboxylic group. The water molecules can be involved in the reaction by performing as a proton-transfer carrier and a stabilizing zwitterion. It can be predicted from our calculations that in the transamination between alpha-amino acids and alpha-keto acids, the carbinolamine is formed with small barrier or even barrierless while the dehydration occurs easily at room temperature. However, without heating the 1,3 proton transfer could not occur as the barrier is 26.7 kcal/mol relative to the reactant complex when including two water molecules. Our results are in good agreement with experimental conclusions.
本文对由NH2CH2COOH + CH2O + nH2O(n = 0, 1, 2)组成的分子复合物的转氨反应进行了计算研究。这项工作得以描述反应中所有中间体和过渡态的几何结构,该反应可分为五个步骤:氨基醇胺形成、脱水、1,3质子转移、水解和氨基醇胺消除。在反应的五个步骤中,水解和消除在与羧基相关的广义酸催化存在下发生。水分子可作为质子转移载体和稳定两性离子参与反应。从我们的计算可以预测,在α-氨基酸和α-酮酸之间的转氨反应中,氨基醇胺以较小的势垒甚至无势垒形成,而脱水在室温下容易发生。然而,在不加热的情况下,1,3质子转移无法发生,因为当包含两个水分子时,相对于反应物复合物,势垒为26.7千卡/摩尔。我们的结果与实验结论高度一致。