Balta Bülent, Aviyente Viktorya
Chemistry Department, Boğaziçi University, 80815 Bebek/Istanbul, Turkey.
J Comput Chem. 2003 Nov 15;24(14):1789-802. doi: 10.1002/jcc.10341.
The relative stabilities of glycine tautomers involved in the intramolecular proton transfer are investigated computationally by considering glycine-water complexes containing up to five water molecules. The supermolecule results are compared with continuum calculations. Specific solute-solvent interactions and solvent induced changes in the solute wave function are considered using the natural bond orbitals (NBO) method. The stabilization of the zwitterion upon solvation is explained by the changes in the wave functions localized on the forming and breaking bonds as well as by the different interaction energies in the zwitterionic and neutral clusters. Only the neutral species exist in mono- and dihydrated clusters and in the gas phase. In the smaller clusters, zwitterions are mainly stabilized by conformational effects, whereas in larger clusters, in particular when glycine is solvated on both sides of its heavy atom backbone, polarization effects dominate the stability of a given tautomer. Generally, the strength of the solute-solvent interactions is governed by the intermolecular charge transfer interactions. As the solvation progresses, the hypothetical gaseous zwitterion is better solvated than the gaseous neutral, making zwitterion to neutral tautomerization progressively less exothermic for clusters containing up to three water molecules, and endothermic for larger clusters. The neutral isomer does not exist for some solvent arrangements with five water molecules. Only solvent arrangements in which water molecules do not interact with the reactive proton are considered. Hence, the experimentally observed double well potential energy surface may be due to such an interaction or to a different reaction mechanism.
通过考虑包含多达五个水分子的甘氨酸 - 水络合物,对参与分子内质子转移的甘氨酸互变异构体的相对稳定性进行了计算研究。将超分子结果与连续介质计算结果进行了比较。使用自然键轨道(NBO)方法考虑了特定的溶质 - 溶剂相互作用以及溶剂引起的溶质波函数变化。两性离子在溶剂化时的稳定性可通过形成和断裂键上局域化的波函数变化以及两性离子簇和中性簇中不同的相互作用能来解释。在单水合和二水合簇以及气相中仅存在中性物种。在较小的簇中,两性离子主要通过构象效应得以稳定,而在较大的簇中,特别是当甘氨酸在其重原子主链两侧都被溶剂化时,极化效应主导了给定互变异构体的稳定性。一般来说,溶质 - 溶剂相互作用的强度由分子间电荷转移相互作用决定。随着溶剂化的进行,假设的气态两性离子比气态中性分子得到更好的溶剂化,使得对于包含多达三个水分子的簇,两性离子到中性互变异构化的放热逐渐减少,而对于更大的簇则变为吸热。对于一些含有五个水分子的溶剂排列,不存在中性异构体。仅考虑水分子不与反应性质子相互作用的溶剂排列。因此,实验观察到的双阱势能面可能是由于这种相互作用或不同的反应机制所致。