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铜绿假单胞菌PAO1精氨酸分解代谢中精氨酸:丙酮酸转氨酶的特性分析

Characterization of an arginine:pyruvate transaminase in arginine catabolism of Pseudomonas aeruginosa PAO1.

作者信息

Yang Zhe, Lu Chung-Dar

机构信息

Department of Biology, Georgia State University, Atlanta, GA 30303, USA.

出版信息

J Bacteriol. 2007 Jun;189(11):3954-9. doi: 10.1128/JB.00262-07. Epub 2007 Apr 6.

Abstract

The arginine transaminase (ATA) pathway represents one of the multiple pathways for L-arginine catabolism in Pseudomonas aeruginosa. The AruH protein was proposed to catalyze the first step in the ATA pathway, converting the substrates L-arginine and pyruvate into 2-ketoarginine and L-alanine. Here we report the initial biochemical characterization of this enzyme. The aruH gene was overexpressed in Escherichia coli, and its product was purified to homogeneity. High-performance liquid chromatography and mass spectrometry (MS) analyses were employed to detect the presence of the transamination products 2-ketoarginine and L-alanine, thus demonstrating the proposed biochemical reaction catalyzed by AruH. The enzymatic properties and kinetic parameters of dimeric recombinant AruH were determined by a coupled reaction with NAD(+) and L-alanine dehydrogenase. The optimal activity of AruH was found at pH 9.0, and it has a novel substrate specificity with an order of preference of Arg > Lys > Met > Leu > Orn > Gln. With L-arginine and pyruvate as the substrates, Lineweaver-Burk plots of the data revealed a series of parallel lines characteristic of a ping-pong kinetic mechanism with calculated V(max) and k(cat) values of 54.6 +/- 2.5 micrromol/min/mg and 38.6 +/- 1.8 s(-1). The apparent K(m) and catalytic efficiency (k(cat)/K(m)) were 1.6 +/- 0.1 mM and 24.1 mM(-1) s(-1) for pyruvate and 13.9 +/- 0.8 mM and 2.8 mM(-1) s(-1) for l-arginine. When L-lysine was used as the substrate, MS analysis suggested Delta(1)-piperideine-2-carboxylate as its transamination product. These results implied that AruH may have a broader physiological function in amino acid catabolism.

摘要

精氨酸转氨酶(ATA)途径是铜绿假单胞菌中L-精氨酸分解代谢的多种途径之一。有人提出AruH蛋白催化ATA途径的第一步反应,即将底物L-精氨酸和丙酮酸转化为2-酮精氨酸和L-丙氨酸。在此,我们报告了该酶的初步生化特性。aruH基因在大肠杆菌中过表达,其产物被纯化至同质。采用高效液相色谱和质谱(MS)分析来检测转氨产物2-酮精氨酸和L-丙氨酸的存在,从而证实了AruH催化的拟生化反应。通过与NAD(+)和L-丙氨酸脱氢酶的偶联反应,测定了二聚体重组AruH的酶学性质和动力学参数。发现AruH在pH 9.0时具有最佳活性,并且具有新的底物特异性,其偏好顺序为Arg > Lys > Met > Leu > Orn > Gln。以L-精氨酸和丙酮酸为底物时,数据的Lineweaver-Burk图显示出一系列平行直线,这是乒乓动力学机制的特征,计算得到的V(max)和k(cat)值分别为54.6±2.5 μmol/min/mg和38.6±1.8 s(-1)。丙酮酸的表观K(m)和催化效率(k(cat)/K(m))分别为1.6±0.1 mM和24.1 mM(-1) s(-1),L-精氨酸的分别为13.9±0.8 mM和2.8 mM(-1) s(-1)。当使用L-赖氨酸作为底物时,MS分析表明Δ(1)-哌啶-2-羧酸是其转氨产物。这些结果表明,AruH在氨基酸分解代谢中可能具有更广泛的生理功能。

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