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突变簇的证据。

Evidence for mutation showers.

作者信息

Wang Jicheng, Gonzalez Kelly D, Scaringe William A, Tsai Kimberly, Liu Ning, Gu Dongqing, Li Wenyan, Hill Kathleen A, Sommer Steve S

机构信息

Department of Molecular Genetics and Bioinformatics Group, Department of Molecular Genetics, City of Hope National Medical Center, Duarte, CA 91010, USA.

出版信息

Proc Natl Acad Sci U S A. 2007 May 15;104(20):8403-8. doi: 10.1073/pnas.0610902104. Epub 2007 May 7.

Abstract

Mutants in the Big Blue transgenic mouse system show spontaneous clustered multiple mutations with unexpectedly high frequency, consistent with chronocoordinate events. We tested the prediction that the multiple mutations seen within the lacI mutation target sometimes occur in the context of chronocoordinate multiple mutations spanning multiple kilobases (mutation showers). Additional sequencing of mutants was performed in regions immediately flanking the lacI region (total of 10.7 kb). Nineteen additional mutations were found outside the lacI region ("ectomutations") from 10 mutants containing two or more lacI mutations, whereas only one ectomutation was found in 130 mutants with a single mutation (P < 0.0001). The mutation showers had an average of approximately one mutation per 3 kb. Four mutants showed closely spaced double mutations in the new sequence, and analysis of the spacing between these mutations revealed significant clustering (P = 0.0098). To determine the extent of the mutation showers, regions (8.5 kb total) remote from the lacI region (approximately 16-17 kb away) were sequenced. Only two additional ectomutations were found in these remote regions, consistent with mutation showers that generally do not extend more than approximately 30 kb. We conclude that mutation showers exist and that they constitute at least 0.2% and possibly 1% or more of mutational events observed in this system. The existence of mutation showers has implications for oncogenesis and evolution, raising the possibilities of "cancer in an instant" and "introns as sponges to reduce the deleterious impact of mutation showers."

摘要

在“大蓝”转基因小鼠系统中的突变体显示出自发的簇状多重突变,其频率出乎意料地高,这与时间坐标事件一致。我们检验了这样一种预测,即在lacI突变靶点内看到的多重突变有时会发生在跨越多个千碱基的时间坐标多重突变(突变簇)的背景下。对突变体在lacI区域紧邻的区域(总共10.7 kb)进行了额外测序。在10个含有两个或更多lacI突变的突变体中,在lacI区域之外发现了19个额外的突变(“外显突变”),而在130个只有单个突变的突变体中仅发现了1个外显突变(P < 0.0001)。突变簇平均每3 kb约有一个突变。4个突变体在新序列中显示出紧密间隔的双重突变,对这些突变之间间隔的分析揭示了显著的聚类(P = 0.0098)。为了确定突变簇的范围,对远离lacI区域(约16 - 17 kb)的区域(总共8.5 kb)进行了测序。在这些远端区域仅发现了另外2个外显突变,这与通常不超过约30 kb的突变簇一致。我们得出结论,突变簇是存在的,并且它们至少占该系统中观察到的突变事件的0.2%,可能为1%或更多。突变簇的存在对肿瘤发生和进化具有影响,增加了“瞬间致癌”以及“内含子作为缓冲以减少突变簇有害影响”的可能性。

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