van Haastert Peter J M, Postma Marten
Department of Molecular Cell Biology, University of Groningen, Haren, The Netherlands.
Biophys J. 2007 Sep 1;93(5):1787-96. doi: 10.1529/biophysj.107.104356. Epub 2007 May 18.
Binding of ligand to its receptor is a stochastic process that exhibits fluctuations in time and space. In chemotaxis, this leads to a noisy input signal. Therefore, in a gradient of chemoattractant, the cell may occasionally experience a "wrong" gradient of occupied receptors. We obtained a simple equation for P(pos), the probability that half of the cell closest to the source of chemoattractant has higher receptor occupancy than the opposite half of the cell. P(pos) depends on four factors, the gradient property delC/sq. root of C, the receptor characteristic R(t)/K(D), a time-averaging constant I, and nonreceptor noise sigma(B). We measured chemotaxis of Dictyostelium cells to known shallow gradients of cAMP and obtained direct estimates for these constants. Furthermore, we observed that in shallow gradients, the measured chemotaxis index is correlated with P(pos), which suggests that chemotaxis in shallow gradients is a pure biased random walk. From the observed chemotaxis and derived time-averaging constant, we deduce that the gradient transducing second messenger has a lifetime of 2-8 s and a diffusion rate constant of approximately 1 microm(2)/s. Potential candidates for such second messengers are discussed.
配体与其受体的结合是一个随机过程,在时间和空间上都存在波动。在趋化作用中,这会导致一个有噪声的输入信号。因此,在趋化因子梯度中,细胞偶尔可能会经历受体占据情况的“错误”梯度。我们得到了一个关于P(pos)的简单方程,即最靠近趋化因子源的细胞一半的受体占有率高于细胞另一半的概率。P(pos)取决于四个因素,趋化因子梯度特性delC/√C、受体特征R(t)/K(D)、时间平均常数I和非受体噪声sigma(B)。我们测量了盘基网柄菌细胞对已知的浅cAMP梯度的趋化作用,并直接估算了这些常数。此外,我们观察到在浅梯度中,测量的趋化指数与P(pos)相关,这表明浅梯度中的趋化作用是一种纯粹的有偏随机游动。根据观察到的趋化作用和推导的时间平均常数,我们推断梯度转导第二信使的寿命为2 - 8秒,扩散速率常数约为1μm²/s。讨论了这种第二信使的潜在候选物。