Suppr超能文献

趋化因子-受体相互作用在检测下限处的随机波动所导致的偏向性随机游走。

Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection.

作者信息

van Haastert Peter J M, Postma Marten

机构信息

Department of Molecular Cell Biology, University of Groningen, Haren, The Netherlands.

出版信息

Biophys J. 2007 Sep 1;93(5):1787-96. doi: 10.1529/biophysj.107.104356. Epub 2007 May 18.

Abstract

Binding of ligand to its receptor is a stochastic process that exhibits fluctuations in time and space. In chemotaxis, this leads to a noisy input signal. Therefore, in a gradient of chemoattractant, the cell may occasionally experience a "wrong" gradient of occupied receptors. We obtained a simple equation for P(pos), the probability that half of the cell closest to the source of chemoattractant has higher receptor occupancy than the opposite half of the cell. P(pos) depends on four factors, the gradient property delC/sq. root of C, the receptor characteristic R(t)/K(D), a time-averaging constant I, and nonreceptor noise sigma(B). We measured chemotaxis of Dictyostelium cells to known shallow gradients of cAMP and obtained direct estimates for these constants. Furthermore, we observed that in shallow gradients, the measured chemotaxis index is correlated with P(pos), which suggests that chemotaxis in shallow gradients is a pure biased random walk. From the observed chemotaxis and derived time-averaging constant, we deduce that the gradient transducing second messenger has a lifetime of 2-8 s and a diffusion rate constant of approximately 1 microm(2)/s. Potential candidates for such second messengers are discussed.

摘要

配体与其受体的结合是一个随机过程,在时间和空间上都存在波动。在趋化作用中,这会导致一个有噪声的输入信号。因此,在趋化因子梯度中,细胞偶尔可能会经历受体占据情况的“错误”梯度。我们得到了一个关于P(pos)的简单方程,即最靠近趋化因子源的细胞一半的受体占有率高于细胞另一半的概率。P(pos)取决于四个因素,趋化因子梯度特性delC/√C、受体特征R(t)/K(D)、时间平均常数I和非受体噪声sigma(B)。我们测量了盘基网柄菌细胞对已知的浅cAMP梯度的趋化作用,并直接估算了这些常数。此外,我们观察到在浅梯度中,测量的趋化指数与P(pos)相关,这表明浅梯度中的趋化作用是一种纯粹的有偏随机游动。根据观察到的趋化作用和推导的时间平均常数,我们推断梯度转导第二信使的寿命为2 - 8秒,扩散速率常数约为1μm²/s。讨论了这种第二信使的潜在候选物。

相似文献

5
Directional sensing of deformed cells under faint gradients.在微弱梯度下变形细胞的定向感知。
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Dec;86(6 Pt 1):060901. doi: 10.1103/PhysRevE.86.060901. Epub 2012 Dec 14.
6
Dictyostelium discoideum chemotaxis: threshold for directed motion.盘基网柄菌的趋化性:定向运动的阈值
Eur J Cell Biol. 2006 Sep;85(9-10):981-9. doi: 10.1016/j.ejcb.2006.01.012. Epub 2006 Mar 10.
7
Predicting spiral wave patterns from cell properties in a model of biological self-organization.在生物自组织模型中根据细胞特性预测螺旋波模式。
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Sep;78(3 Pt 1):031917. doi: 10.1103/PhysRevE.78.031917. Epub 2008 Sep 23.
10
Chemotaxis with directional sensing during Dictyostelium aggregation.聚集期间的定向趋化作用与方向感
C R Biol. 2013 Nov-Dec;336(11-12):565-71. doi: 10.1016/j.crvi.2013.10.008. Epub 2013 Nov 7.

引用本文的文献

5
Memoryless chemotaxis with discrete cues.无记忆化学趋向性与离散线索。
J R Soc Interface. 2024 Jul;21(216):20240100. doi: 10.1098/rsif.2024.0100. Epub 2024 Jul 31.
6
Trade-offs in concentration sensing in dynamic environments.动态环境中浓度传感的权衡。
Biophys J. 2024 May 21;123(10):1184-1194. doi: 10.1016/j.bpj.2024.03.025. Epub 2024 Mar 25.
7
Spontaneous signal generation by an excitable system for cell migration.用于细胞迁移的可兴奋系统的自发信号生成。
Front Cell Dev Biol. 2024 Feb 28;12:1373609. doi: 10.3389/fcell.2024.1373609. eCollection 2024.

本文引用的文献

3
Dictyostelium discoideum chemotaxis: threshold for directed motion.盘基网柄菌的趋化性:定向运动的阈值
Eur J Cell Biol. 2006 Sep;85(9-10):981-9. doi: 10.1016/j.ejcb.2006.01.012. Epub 2006 Mar 10.
5
Physical limits to biochemical signaling.生化信号传导的物理限制。
Proc Natl Acad Sci U S A. 2005 Jul 19;102(29):10040-5. doi: 10.1073/pnas.0504321102. Epub 2005 Jul 8.
7
Calcium oscillations in a triplet of pancreatic acinar cells.胰腺腺泡细胞三联体中的钙振荡。
Biophys J. 2005 Mar;88(3):1535-51. doi: 10.1529/biophysj.104.047357. Epub 2004 Dec 13.
8
Making sense of it all: bacterial chemotaxis.理解这一切:细菌趋化性。
Nat Rev Mol Cell Biol. 2004 Dec;5(12):1024-37. doi: 10.1038/nrm1524.
10
Diversity in chemotaxis mechanisms among the bacteria and archaea.细菌和古细菌趋化机制的多样性。
Microbiol Mol Biol Rev. 2004 Jun;68(2):301-19. doi: 10.1128/MMBR.68.2.301-319.2004.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验