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短双歧杆菌UCC2003中小热休克蛋白编码基因hsp20的分子特征分析

Molecular characterization of hsp20, encoding a small heat shock protein of bifidobacterium breve UCC2003.

作者信息

Ventura Marco, Canchaya Carlos, Zhang Ziding, Fitzgerald Gerald F, van Sinderen Douwe

机构信息

Department of Genetics, Anthropology and Evolution, University of Parma, Parma, Italy.

出版信息

Appl Environ Microbiol. 2007 Jul;73(14):4695-703. doi: 10.1128/AEM.02496-06. Epub 2007 May 18.

Abstract

Small heat shock proteins (sHSPs) are members of a diverse family of stress proteins that are important in cells to protect proteins under stressful conditions. Genome analysis of Bifidobacterium breve UCC2003 revealed a single sHSP-encoding gene, which was classified as a hsp20 gene by comparative analyses. Genomic surveillance of available genome sequences indicated that hsp20 homologs are not widely distributed in bacteria. In members of the genus Bifidobacterium, this gene appears to be present in only 7 of the 30 currently described species. Moreover, phylogenetic analysis using all available bacterial and eukaryotic sHSP sequences revealed a close relationship between bifidobacterial HSP20 and the class B sHSPs found in members of the division Firmicutes. The results of this comparative analysis and variation in codon usage content suggest that hsp20 was acquired by certain bifidobacteria through horizontal gene transfer. Analysis by slot blot, Northern blot, and primer extension experiments showed that transcription of hsp20 is strongly induced in response to severe heat shock regimens and by osmotic shock.

摘要

小分子热休克蛋白(sHSPs)是一类多样的应激蛋白家族成员,在细胞中对在应激条件下保护蛋白质很重要。短双歧杆菌UCC2003的基因组分析揭示了一个单一的编码sHSP的基因,通过比较分析将其归类为hsp20基因。对现有基因组序列的基因组监测表明,hsp20同源物在细菌中分布不广泛。在双歧杆菌属成员中,该基因似乎仅存在于目前描述的30个物种中的7个物种中。此外,使用所有可用的细菌和真核生物sHSP序列进行的系统发育分析揭示了双歧杆菌HSP20与在厚壁菌门成员中发现的B类sHSP之间的密切关系。这种比较分析的结果以及密码子使用内容的变化表明,hsp20是某些双歧杆菌通过水平基因转移获得的。通过狭缝印迹、Northern印迹和引物延伸实验分析表明,hsp20的转录在严重热休克方案和渗透休克的刺激下强烈诱导。

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