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根据利什曼原虫热休克蛋白 20 基因的进化和物种鉴别。

Evolution and species discrimination according to the Leishmania heat-shock protein 20 gene.

机构信息

Departamento de Parasitología, Instituto de Medicina Tropical "Pedro Kourí", Habana, Cuba.

出版信息

Infect Genet Evol. 2013 Aug;18:229-37. doi: 10.1016/j.meegid.2013.05.020. Epub 2013 May 28.

DOI:10.1016/j.meegid.2013.05.020
PMID:23722022
Abstract

The Leishmania genus comprises up to 35 species, of which 20 are responsible for human disease. However, the taxonomic status for many of them is under discussion. The small Heat Shock Proteins (sHSPs) are physiologically relevant, protecting cellular proteins from aggregation and maintaining cellular viability under intensive stress conditions. In Leishmania, a protein of this class was previously described, the 20-kDa heat-shock protein (HSP20), which is encoded by a single gene. In the present study, we used this target, alone or in combination with hsp70 gene, to investigate the phylogenetic relationships among Leishmania species. Using a pair of degenerate primers it was possible amplifying a 370bp fragment of the hsp20 coding region in 39 strains of very different geographic origins, representing in total 16 Leishmania species (14 if L. chagasi and L. archibaldi are considered synonymous names of L. infantum and L. donovani, respectively). Nucleotide sequences were readily obtained by direct sequencing of the amplification products. Both phylogenetic trees and networks based on either hsp20 sequences or combined datasets of hsp20 and hsp70 sequences were constructed. These phylogenic analyses supported the division of the Leishmania genus into nine species: L. (L.) donovani, L. (L.) major, L. (L.) tropica, L. (L.) aethiopica, L. (L.) mexicana, L. (V.) lainsoni, L. (V.) naiffi, L. (V.) guyanensis and L. (V.) braziliensis. Additionally, by network analysis, the subspecies L. (L.) donovani infantum and L. (V.) braziliensis peruviana were recognized within the L. (L.) donovani and L. (V.) braziliensis species, respectively. Therefore, hsp20 gene was found to be a suitable molecular marker for Leishmania typing and classification purposes. In addition, this study represents a solid contribution to the objective of establishing a more reliable taxonomy for the genus Leishmania.

摘要

利什曼原虫属包括多达 35 个种,其中 20 种可导致人类疾病。然而,许多种的分类地位仍存在争议。小热休克蛋白(sHSPs)在生理上具有相关性,可防止细胞蛋白聚集,并在强烈的应激条件下维持细胞活力。在利什曼原虫中,先前已经描述了该类别的一种蛋白质,即 20kDa 热休克蛋白(HSP20),它由单个基因编码。在本研究中,我们使用该靶标(单独或与 hsp70 基因一起)来研究利什曼原虫种间的系统发育关系。使用一对简并引物,我们能够在来自不同地理来源的 39 株菌株中扩增 hsp20 编码区的 370bp 片段,这些菌株总共代表了 16 种利什曼原虫(如果将 L. chagasi 和 L. archibaldi 分别视为 L. infantum 和 L. donovani 的同义词,则为 14 种)。通过直接对扩增产物进行测序,很容易获得核苷酸序列。基于 hsp20 序列或 hsp20 和 hsp70 序列组合数据集构建了系统发育树和网络图。这些系统发育分析支持将利什曼原虫属分为九个种:L.(L.)donovani、L.(L.)major、L.(L.)tropica、L.(L.)aethiopica、L.(L.)mexicana、L.(V.)lainsoni、L.(V.)naiffi、L.(V.)guyanensis 和 L.(V.)braziliensis。此外,通过网络分析,在 L.(L.)donovani 和 L.(V.)braziliensis 种内分别识别出亚种 L.(L.)donovani infantum 和 L.(V.)braziliensis peruviana。因此,hsp20 基因被发现是用于利什曼原虫分型和分类的合适分子标记。此外,本研究为建立更可靠的利什曼原虫属分类学做出了重要贡献。

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