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本文引用的文献

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Functioning and robustness of a bacterial circadian clock.细菌生物钟的功能与稳健性。
Mol Syst Biol. 2007;3:90. doi: 10.1038/msb4100128. Epub 2007 Mar 13.
2
Competition effects shape the response sensitivity and kinetics of phosphorylation cycles in cell signaling.竞争效应塑造了细胞信号传导中磷酸化循环的反应敏感性和动力学。
Ann N Y Acad Sci. 2006 Dec;1091:517-30. doi: 10.1196/annals.1378.093.
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Growth factor-induced MAPK network topology shapes Erk response determining PC-12 cell fate.生长因子诱导的MAPK网络拓扑结构塑造决定PC-12细胞命运的Erk反应。
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MAPK-mediated bimodal gene expression and adaptive gradient sensing in yeast.丝裂原活化蛋白激酶介导的酵母双峰基因表达及适应性梯度感知
Nature. 2007 Mar 1;446(7131):46-51. doi: 10.1038/nature05561. Epub 2007 Feb 18.
5
Response to bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores.细胞凋亡中双稳性的应答:Bax、Bcl-2及线粒体通透性转换孔的作用
Biophys J. 2007 May 1;92(9):3332-4. doi: 10.1529/biophysj.106.100362. Epub 2007 Feb 2.
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Docking interactions in protein kinase and phosphatase networks.蛋白激酶和磷酸酶网络中的对接相互作用。
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Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability.数学建模确定凋亡抑制剂是正反馈和双稳态的介质。
PLoS Comput Biol. 2006 Sep 15;2(9):e120. doi: 10.1371/journal.pcbi.0020120. Epub 2006 Jul 28.
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Bistability from double phosphorylation in signal transduction. Kinetic and structural requirements.信号转导中双磷酸化导致的双稳态。动力学和结构要求。
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Mixed analog/digital gonadotrope biosynthetic response to gonadotropin-releasing hormone.促性腺激素释放激素对混合模拟/数字促性腺激素细胞的生物合成反应。
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Effects of sequestration on signal transduction cascades.隔离对信号转导级联反应的影响。
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竞争性对接相互作用可导致丝裂原活化蛋白激酶(MAPK)级联反应中的双稳态。

Competing docking interactions can bring about bistability in the MAPK cascade.

作者信息

Legewie Stefan, Schoeberl Birgit, Blüthgen Nils, Herzel Hanspeter

机构信息

Institute for Theoretical Biology, Humboldt University, Berlin, Germany.

出版信息

Biophys J. 2007 Oct 1;93(7):2279-88. doi: 10.1529/biophysj.107.109132. Epub 2007 May 25.

DOI:10.1529/biophysj.107.109132
PMID:17526574
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1965452/
Abstract

Mitogen-activated protein kinases are crucial regulators of various cell fate decisions including proliferation, differentiation, and apoptosis. Depending on the cellular context, the Raf-Mek-Erk mitogen-activated protein kinase cascade responds to extracellular stimuli in an all-or-none manner, most likely due to bistable behavior. Here, we describe a previously unrecognized positive-feedback mechanism that emerges from experimentally observed sequestration effects in the core Raf-Mek-Erk cascade. Unphosphorylated/monophosphorylated Erk sequesters Mek into Raf-inaccessible complexes upon weak stimulation, and thereby inhibits cascade activation. Mek, once phosphorylated by Raf, triggers Erk phosphorylation, which in turn induces dissociation of Raf-inaccessible Mek-Erk heterodimers, and thus further amplifies Mek phosphorylation. We show that this positive circuit can bring about bistability for parameter values measured experimentally in living cells. Previous studies revealed that bistability can also arise from enzyme depletion effects in the Erk double (de)phosphorylation cycle. We demonstrate that the feedback mechanism proposed in this article synergizes with such enzyme depletion effects to bring about a much larger bistable range than either mechanism alone. Our results show that stable docking interactions and competition effects, which are common in protein kinase cascades, can result in sequestration-based feedback, and thus can have profound effects on the qualitative behavior of signaling pathways.

摘要

丝裂原活化蛋白激酶是多种细胞命运决定的关键调节因子,包括增殖、分化和凋亡。根据细胞环境的不同,Raf-Mek-Erk丝裂原活化蛋白激酶级联反应以全或无的方式对细胞外刺激做出反应,这很可能是由于双稳态行为。在这里,我们描述了一种以前未被认识的正反馈机制,它源于在核心Raf-Mek-Erk级联反应中通过实验观察到的隔离效应。在弱刺激下,未磷酸化/单磷酸化的Erk将Mek隔离到Raf无法接近的复合物中,从而抑制级联反应的激活。一旦Mek被Raf磷酸化,就会触发Erk磷酸化,进而诱导Raf无法接近的Mek-Erk异二聚体解离,从而进一步放大Mek磷酸化。我们表明,这个正循环可以在活细胞中通过实验测量的参数值产生双稳态。先前的研究表明,双稳态也可能源于Erk双(去)磷酸化循环中的酶消耗效应。我们证明,本文提出的反馈机制与这种酶消耗效应协同作用,产生比单独任何一种机制都大得多的双稳态范围。我们的结果表明,在蛋白激酶级联反应中常见的稳定对接相互作用和竞争效应可导致基于隔离的反馈,从而对信号通路的定性行为产生深远影响。