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拓展自然界最具通用性催化剂的能力:哺乳动物异源物代谢性细胞色素P450的定向进化

Extending the capabilities of nature's most versatile catalysts: directed evolution of mammalian xenobiotic-metabolizing P450s.

作者信息

Gillam Elizabeth M J

机构信息

School of Biomedical Sciences, The University of Queensland, St. Lucia, Brisbane 4072, Australia.

出版信息

Arch Biochem Biophys. 2007 Aug 15;464(2):176-86. doi: 10.1016/j.abb.2007.04.033. Epub 2007 May 15.

Abstract

Cytochrome P450 enzymes are amongst the most versatile enzymatic catalysts known. The ability to introduce a single atom of oxygen into an organic substrate has led to the diversification and exploitation of these enzymes throughout nature. Nowhere is this versatility more apparent than in the mammalian liver, where P450 monooxygenases catalyze the metabolic clearance of innumerate drugs and other environmental chemicals. In addition to the aromatic and aliphatic hydroxylations, N- and O-dealkylations, and heteroatom oxidations that are common in drug metabolism, many more unusual reactions catalyzed by P450s have been discovered, including reductions, group transfers and other biotransformations not typically associated with monooxygenases. A research area that shows great potential for development over the next few decades is the directed evolution of P450s as biocatalysts. Mammalian xenobiotic-metabolizing P450s are especially well suited to such protein engineering due to their ability to interact with relatively wide ranges of substrates with marked differences in structure and physicochemical properties. Typical characteristics, such as the low turnover rates and poor coupling seen during the metabolism of xenobiotics, as well as the enzyme specificity towards particular substrates and reactions, can be improved by directed evolution. This mini-review will cover the fundamental enabling technologies required to successfully engineer P450s, examine the work done to date on the directed evolution of mammalian forms, and provide a perspective on what will be required for the successful implementation of engineered enzymes.

摘要

细胞色素P450酶是已知的最具通用性的酶催化剂之一。能够将单个氧原子引入有机底物,这使得这些酶在整个自然界中得以多样化和广泛应用。这种通用性在哺乳动物肝脏中最为明显,在那里P450单加氧酶催化无数药物和其他环境化学物质的代谢清除。除了药物代谢中常见的芳香族和脂肪族羟基化、N-和O-脱烷基化以及杂原子氧化反应外,人们还发现了许多由P450催化的更不寻常的反应,包括还原反应、基团转移反应以及其他通常与单加氧酶无关的生物转化反应。在未来几十年中具有巨大发展潜力的一个研究领域是将P450作为生物催化剂进行定向进化。哺乳动物的外源性物质代谢P450特别适合进行这种蛋白质工程,因为它们能够与结构和物理化学性质差异显著的相对广泛的底物相互作用。通过定向进化,可以改善一些典型特征,例如在代谢外源性物质过程中观察到的低周转率和低偶联效率,以及酶对特定底物和反应的特异性。本综述将涵盖成功改造P450所需的基本技术,审视迄今为止在哺乳动物形式的定向进化方面所做的工作,并就成功应用工程酶所需的条件提供一个观点。

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