Mavridou Despoina A I, Stevens Julie M, Ferguson Stuart J, Redfield Christina
Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK.
J Mol Biol. 2007 Jul 20;370(4):643-58. doi: 10.1016/j.jmb.2007.04.038. Epub 2007 Apr 20.
The periplasmic C-terminal domain of the Escherichia coli DsbD protein (cDsbD) has a thioredoxin fold. The two cysteine residues in the CXXC motif serve as the reductant for the disulfide bond of the N-terminal domain which can in turn act as a reductant for various periplasmic partners. The resulting disulfide bond in cDsbD is reduced via an unknown mechanism by the transmembrane helical domain of the protein. We show by NMR analysis of (13)C, (15)N-labelled cDsbD that the protein is rigid, is stable to extremes of pH and undergoes only localized conformational changes in the vicinity of the CXXC motif, and in adjacent regions of secondary structure, upon undergoing the reduced/oxidized transition. pK(a) values have been determined, using 2D NMR, for the N-terminal cysteine of the CXXC motif, Cys461, as well as for other active-site residues. It is demonstrated using site-directed mutagenesis that the negative charges of the side-chains of Asp455 and Glu468 in the active site contribute to the unusually high pK(a) value, 10.5, of Cys461. This value is higher than expected from knowledge of the reduction potential of cDsbD. In a double mutant of cDsbD, D455N/E468Q, the pK(a) value of Cys461 is lowered to 8.6, a value close to that expected for an unperturbed cysteine residue. The pK(a) value of the second cysteine in wild-type cDsbD, Cys464, is significantly higher than the maximum pH value that was studied (pH 12.2).
大肠杆菌DsbD蛋白的周质C末端结构域(cDsbD)具有硫氧还蛋白折叠结构。CXXC基序中的两个半胱氨酸残基作为N末端结构域二硫键的还原剂,而N末端结构域又可作为各种周质伴侣的还原剂。cDsbD中形成的二硫键通过该蛋白的跨膜螺旋结构域经由未知机制被还原。我们通过对(13)C、(15)N标记的cDsbD进行核磁共振分析表明,该蛋白结构刚性,对极端pH稳定,在经历还原/氧化转变时,仅在CXXC基序附近以及二级结构的相邻区域发生局部构象变化。使用二维核磁共振已测定了CXXC基序的N末端半胱氨酸Cys461以及其他活性位点残基的pK(a)值。通过定点诱变证明,活性位点中Asp455和Glu468侧链的负电荷有助于Cys461具有异常高的pK(a)值10.5。该值高于根据cDsbD还原电位的知识所预期的值。在cDsbD的双突变体D455N/E468Q中,Cys461的pK(a)值降至8.6,该值接近未受干扰的半胱氨酸残基预期的值。野生型cDsbD中第二个半胱氨酸Cys464的pK(a)值明显高于所研究的最大pH值(pH 12.2)。