Lettre Guillaume, Butler Johannah L, Ardlie Kristin G, Hirschhorn Joel N
Program in Medical and Population Genetics, Broad Institute of Harvard and Massachusetts Institute of Technology, Seven Cambridge Center, Cambridge, MA 02142, USA.
Hum Genet. 2007 Sep;122(2):129-39. doi: 10.1007/s00439-007-0385-4. Epub 2007 Jun 2.
Stature (adult height) is one of the most heritable human traits, yet few genes, if any, have been convincingly associated with adult height variation in the general population. Here, we selected 150 tag SNPs from eight candidate genes in the growth hormone (GH)/insulin-like growth factor-1 (IGF1) axis (GHR, GHRH, GHRHR, IGF1, IGFALS, IGFBP3, JAK2, STAT5B), and genotyped them in approximately 2,200 individuals ascertained for short or tall stature. Nominally significant tag SNPs were then tested in three additional replication cohorts, including a family-based panel to rule out spurious associations owing to population stratification. Across the four height cohorts (N = 6,075 individuals), we did not observe any consistent associations between stature and common variants (> or =5% minor allele frequency) in these eight genes, including a common deletion of the growth hormone receptor gene exon 3. Tests of epistatic interactions between these genes did not yield any results beyond those expected by chance. Although we have not tested all genes in the GH/IGF1 axis, our results indicate that common variation in these GH/IGF1 axis genes is not a major determinant of stature, and suggest that if common variation contributes to adult height variation in the general population, the variants are in other, possibly unanticipated genes.
身高(成人身高)是人类最具遗传性的特征之一,但在普通人群中,即便有,也仅有极少数基因能令人信服地与成人身高变异相关联。在此,我们从生长激素(GH)/胰岛素样生长因子-1(IGF1)轴的八个候选基因(GHR、GHRH、GHRHR、IGF1、IGFALS、IGFBP3、JAK2、STAT5B)中选取了150个标签单核苷酸多态性(tag SNPs),并在约2200名因身材矮小或高大而被确定的个体中对其进行基因分型。然后,在另外三个复制队列中对名义上显著的标签单核苷酸多态性进行测试,其中包括一个基于家系的样本组,以排除由于群体分层导致的虚假关联。在这四个身高队列(共6075名个体)中,我们未观察到这八个基因中的任何一个基因的身材与常见变异(次要等位基因频率≥5%)之间存在任何一致的关联,包括生长激素受体基因外显子3的常见缺失。对这些基因之间上位性相互作用的测试并未产生任何超出偶然预期的结果。尽管我们尚未对GH/IGF1轴中的所有基因进行测试,但我们的结果表明,这些GH/IGF1轴基因中的常见变异并非身高的主要决定因素,并表明如果常见变异对普通人群的成人身高变异有贡献,那么这些变异存在于其他可能未被预料到的基因中。