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南蒂罗尔三个群体微隔离区的遗传学研究(MICROS):研究设计与流行病学展望。

The genetic study of three population microisolates in South Tyrol (MICROS): study design and epidemiological perspectives.

作者信息

Pattaro Cristian, Marroni Fabio, Riegler Alice, Mascalzoni Deborah, Pichler Irene, Volpato Claudia B, Dal Cero Umberta, De Grandi Alessandro, Egger Clemens, Eisendle Agatha, Fuchsberger Christian, Gögele Martin, Pedrotti Sara, Pinggera Gerd K, Stefanov Stefan A, Vogl Florian D, Wiedermann Christian J, Meitinger Thomas, Pramstaller Peter P

机构信息

Institute of Genetic Medicine, European Academy, Bolzano, Italy.

出版信息

BMC Med Genet. 2007 Jun 5;8:29. doi: 10.1186/1471-2350-8-29.

Abstract

BACKGROUND

There is increasing evidence of the important role that small, isolated populations could play in finding genes involved in the etiology of diseases. For historical and political reasons, South Tyrol, the northern most Italian region, includes several villages of small dimensions which remained isolated over the centuries.

METHODS

The MICROS study is a population-based survey on three small, isolated villages, characterized by: old settlement; small number of founders; high endogamy rates; slow/null population expansion. During the stage-1 (2002/03) genealogical data, screening questionnaires, clinical measurements, blood and urine samples, and DNA were collected for 1175 adult volunteers. Stage-2, concerning trait diagnoses, linkage analysis and association studies, is ongoing. The selection of the traits is being driven by expert clinicians. Preliminary, descriptive statistics were obtained. Power simulations for finding linkage on a quantitative trait locus (QTL) were undertaken.

RESULTS

Starting from participants, genealogies were reconstructed for 50,037 subjects, going back to the early 1600s. Within the last five generations, subjects were clustered in one pedigree of 7049 subjects plus 178 smaller pedigrees (3 to 85 subjects each). A significant probability of familial clustering was assessed for many traits, especially among the cardiovascular, neurological and respiratory traits. Simulations showed that the MICROS pedigree has a substantial power to detect a LOD score > or = 3 when the QTL specific heritability is > or = 20%.

CONCLUSION

The MICROS study is an extensive, ongoing, two-stage survey aimed at characterizing the genetic epidemiology of Mendelian and complex diseases. Our approach, involving different scientific disciplines, is an advantageous strategy to define and to study population isolates. The isolation of the Alpine populations, together with the extensive data collected so far, make the MICROS study a powerful resource for the study of diseases in many fields of medicine. Recent successes and simulation studies give us confidence that our pedigrees can be valuable both in finding new candidates loci and to confirm existing candidate genes.

摘要

背景

越来越多的证据表明,小型孤立人群在寻找与疾病病因相关的基因方面可能发挥重要作用。由于历史和政治原因,意大利最北部的南蒂罗尔地区有几个规模较小的村庄,这些村庄在几个世纪里一直处于孤立状态。

方法

MICROS研究是一项基于人群的调查,涉及三个小型孤立村庄,其特点是:定居历史悠久;创始者数量少;近亲结婚率高;人口增长缓慢/停滞。在第一阶段(2002/03年),为1175名成年志愿者收集了系谱数据、筛查问卷、临床测量数据、血液和尿液样本以及DNA。第二阶段涉及性状诊断、连锁分析和关联研究,正在进行中。性状的选择由临床专家推动。获得了初步的描述性统计数据。对定量性状位点(QTL)进行连锁分析的功效模拟。

结果

从参与者开始,重建了50,037名受试者的系谱,可追溯到17世纪初。在过去五代中,受试者被聚类为一个包含7049名受试者的家系以及178个较小的家系(每个家系3至85名受试者)。对许多性状评估了显著的家族聚集概率,尤其是在心血管、神经和呼吸性状中。模拟表明,当QTL特异性遗传率≥20%时,MICROS家系有很大的能力检测到LOD得分≥3。

结论

MICROS研究是一项广泛的、正在进行的两阶段调查,旨在描述孟德尔疾病和复杂疾病的遗传流行病学。我们的方法涉及不同的科学学科,是定义和研究人群隔离的有利策略。阿尔卑斯人群的隔离,以及迄今为止收集的大量数据,使MICROS研究成为医学许多领域疾病研究的强大资源。近期的成功和模拟研究让我们相信,我们的家系在寻找新的候选基因座和确认现有候选基因方面都可能很有价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e0f/1913911/aca85866940d/1471-2350-8-29-1.jpg

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