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[NiFe]氢化酶成熟蛋白HypC和HypD的结晶及初步X射线晶体学研究

Crystallization and preliminary X-ray crystallographic studies of the [NiFe] hydrogenase maturation proteins HypC and HypD.

作者信息

Watanabe Satoshi, Matsumi Rie, Atomi Haruyuki, Imanaka Tadayuki, Miki Kunio

机构信息

Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jun 1;63(Pt 6):538-41. doi: 10.1107/S1744309107023391. Epub 2007 May 31.

Abstract

HypC and HypD proteins are required for the insertion of the Fe atom with diatomic ligands into the large subunit of [NiFe] hydrogenases, an important step in the maturation process of this type of hydrogenase. The crystallization and preliminary crystallographic analysis of HypC and HypD from Thermococcus kodakaraensis KOD1 are reported. Crystals of HypC grew in two different forms. Monoclinic crystals of HypC in space group C2 with unit-cell parameters a = 78.2, b = 59.1, c = 54.0 A, beta = 109.0 degrees were obtained using PEG 4000 and ammonium sulfate or sodium bromide as precipitants. They diffracted X-rays to 1.8 A resolution and were suitable for structure determination. Crystals of HypD were also obtained in two different forms. The monoclinic crystals obtained using PEG 4000 and magnesium chloride diffracted X-rays to beyond 2.1 A resolution, despite growing as clusters. They belong to space group P2(1), with unit-cell parameters a = 42.3, b = 118.4, c = 81.2 A, beta = 100.9 degrees , and are suitable for data collection.

摘要

HypC和HypD蛋白是将带有双原子配体的铁原子插入[NiFe]氢化酶大亚基所必需的,这是此类氢化酶成熟过程中的重要一步。本文报道了来自嗜热栖热菌KOD1的HypC和HypD的结晶及初步晶体学分析。HypC晶体以两种不同形式生长。使用聚乙二醇4000和硫酸铵或溴化钠作为沉淀剂,获得了空间群为C2的单斜晶系HypC晶体,其晶胞参数为a = 78.2、b = 59.1、c = 54.0 Å,β = 109.0°。它们的X射线衍射分辨率达到1.8 Å,适合进行结构测定。HypD晶体也以两种不同形式获得。使用聚乙二醇4000和氯化镁获得的单斜晶体,尽管以簇状生长,但X射线衍射分辨率超过2.1 Å。它们属于空间群P2(1),晶胞参数为a = 42.3、b = 118.4、c = 81.2 Å,β = 100.9°,适合进行数据收集。

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Metal insertion into NiFe-hydrogenases.金属插入镍铁氢化酶中。
Biochem Soc Trans. 2002 Aug;30(4):674-80. doi: 10.1042/bst0300674.

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