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一种人工进化的白蛋白结合模块有助于对GA结构域与系统发育上不同的白蛋白之间的相互作用进行化学位移表位图谱分析。

An artificially evolved albumin binding module facilitates chemical shift epitope mapping of GA domain interactions with phylogenetically diverse albumins.

作者信息

He Yanan, Chen Yihong, Rozak David A, Bryan Philip N, Orban John

机构信息

Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD 20850, USA.

出版信息

Protein Sci. 2007 Jul;16(7):1490-4. doi: 10.1110/ps.072799507. Epub 2007 Jun 13.

Abstract

Protein G-related albumin-binding (GA) modules occur on the surface of numerous Gram-positive bacterial pathogens and their presence may promote bacterial growth and virulence in mammalian hosts. We recently used phage display selection to evolve a GA domain, PSD-1 (phage selected domain-1), which tightly bound phylogenetically diverse albumins. With respect to PSD-1's broad albumin binding specificity, it remained unclear how the evolved binding epitope compared to those of naturally occurring GA domains and whether PSD-1's binding mode was the same for different albumins. We investigate these questions here using chemical shift perturbation measurements of PSD-1 with rabbit serum albumin (RSA) and human serum albumin (HSA) and put the results in the context of previous work on structure and dynamics of GA domains. Combined, these data provide insights into the requirements for broad binding specificity in GA-albumin interactions. Moreover, we note that using the phage-optimized PSD-1 protein significantly diminishes the effects of exchange broadening at the binding interface between GA modules and albumin, presumably through stabilization of a ligand-bound conformation. The employment of artificially evolved domains may be generally useful in NMR structural studies of other protein-protein complexes.

摘要

与蛋白质G相关的白蛋白结合(GA)模块存在于许多革兰氏阳性细菌病原体的表面,它们的存在可能促进细菌在哺乳动物宿主中的生长和毒力。我们最近利用噬菌体展示筛选技术进化出了一个GA结构域,即PSD-1(噬菌体筛选结构域-1),它能紧密结合系统发育上不同的白蛋白。关于PSD-1广泛的白蛋白结合特异性,与天然存在的GA结构域相比,进化后的结合表位如何,以及PSD-1对不同白蛋白的结合模式是否相同,仍不清楚。我们在这里使用PSD-1与兔血清白蛋白(RSA)和人血清白蛋白(HSA)的化学位移扰动测量来研究这些问题,并将结果与之前关于GA结构域的结构和动力学的工作相结合。综合这些数据,为GA-白蛋白相互作用中广泛结合特异性的要求提供了见解。此外,我们注意到,使用噬菌体优化的PSD-1蛋白显著减少了GA模块与白蛋白结合界面处交换加宽的影响,这可能是通过稳定配体结合构象实现的。人工进化结构域的应用可能在其他蛋白质-蛋白质复合物的核磁共振结构研究中普遍有用。

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