Núñez-Zapata Jano, Cubas Paloma, Hawksworth David L, Crespo Ana
Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain.
PLoS One. 2015 May 11;10(5):e0126981. doi: 10.1371/journal.pone.0126981. eCollection 2015.
The genetic diversity and population structure of the foliose lichenized fungus Parmelina tiliacea has been analyzed through its geographical range, including samples from Macaronesia (Canary Islands), the Mediterranean, and Eurosiberia. DNA sequences from the nuclear ribosomal internal transcribed spacer, the mitochondrial large subunit ribosomal RNA gene, and the translation elongation factor 1-α were used as molecular markers. The haplotypes of the three markers and the molecular variance analyses of multilocus haplotypes showed the highest diversity in the Canary Islands, while restricted haplotypes occurred at high frequencies in Mediterranean coastal samples. The multilocus haplotypes formed three unevenly distributed clusters (clusters 1-3). In the Canary Islands all the haplotypes were present in a similar proportion, while the coastal Mediterranean sites had almost exclusively haplotypes of cluster 3; cluster 2 predominated in inland Mediterranean sites; and cluster 1 was more abundant in central and northern Europe (Eurosiberian area). The distribution of clusters is partially explained by climatic factors, and its interaction with local spatial structure, but much of the variation remains unexplained. The high frequency of individuals in the Canary Islands with haplotypes shared with other areas suggests that could be a refugium of genetic diversity, and the high frequency of individuals of the Mediterranean coastal sites with restricted haplotypes indicates that gene flow to contiguous areas may be restricted. This is significant for the selection of areas for conservation purposes, as those with most genetic variation may reflect historical factors and biological properties of the species.
通过对叶状地衣真菌蒂氏梅衣(Parmelina tiliacea)地理分布范围的研究,分析了其遗传多样性和种群结构,研究样本来自马卡罗尼西亚(加那利群岛)、地中海地区和欧亚西伯利亚地区。核糖体DNA内转录间隔区、线粒体大亚基核糖体RNA基因以及翻译延伸因子1-α的DNA序列被用作分子标记。三个标记的单倍型以及多位点单倍型的分子方差分析表明,加那利群岛的多样性最高,而在地中海沿岸样本中,受限单倍型出现的频率较高。多位点单倍型形成了三个分布不均的聚类(聚类1-3)。在加那利群岛,所有单倍型的比例相似,而地中海沿岸地区几乎只有聚类3的单倍型;聚类2在地中海内陆地区占主导地位;聚类1在欧洲中部和北部(欧亚西伯利亚地区)更为丰富。聚类的分布部分是由气候因素及其与局部空间结构的相互作用所解释的,但仍有许多变异无法解释。加那利群岛中与其他地区共享单倍型的个体频率较高,这表明该地区可能是遗传多样性的避难所,而地中海沿岸地区受限单倍型个体的高频率表明,向相邻地区的基因流动可能受到限制。这对于选择保护区域具有重要意义,因为遗传变异最多的区域可能反映了该物种的历史因素和生物学特性。