Vázquez-Pérez Adrián R, Fernández-Velasco D Alejandro
Laboratorio de Fisicoquímica e Ingeniería de Proteínas, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Apartado Postal 70-159, México D.F., 04510 Mexico.
Biochemistry. 2007 Jul 24;46(29):8624-33. doi: 10.1021/bi061879j. Epub 2007 Jun 27.
Triosephosphate isomerase (TIM) is a dimeric enzyme formed by two identical (beta/alpha)8 barrels. In this work, we compare the unfolding and refolding of the TIMs from Entamoeba histolytica (EhTIM) and baker's yeast (yTIM). A monomeric intermediate was detected in the GdnHCl-induced unfolding of EhTIM. The thermodynamic, spectroscopic, catalytic, and hydrodynamic properties of this intermediate were found to be very similar to those previously described for a monomeric intermediate of yTIM observed in GdnHCl. Monomer unfolding was reversible for both TIMs; however, the dissociation step was reversible in yTIM and irreversible in EhTIM. Monomer unfolding induced by high pressure in the presence of GdnHCl was a reversible process. DeltaGUnf, DeltaVUnf, and P1/2 were obtained for the 0.7-1.2 M GdnHCl range. The linear extrapolation of these thermodynamic parameters to the absence of denaturant showed the same values for both intermediates. The DeltaVUnfH2O values calculated for EhTIM and yTIM monomeric intermediates are the same within experimental error (-57 +/- 10 and -76 +/- 14 mL/mol, respectively). These DeltaVUnf H2O values are smaller than those reported for the unfolding of monomeric proteins of similar size, suggesting that TIM intermediates are only partially hydrated. |DeltaVUnf| increased with denaturant concentration; this behavior is probably related to structural changes in the unfolded state induced by GdnHCl and pressure. From the thermodynamic parameters that were obtained, it is predicted that in the absence of denaturants, pressure would induce monomer unfolding (P1/2 approximately 140 MPa) prior to dimer dissociation (P1/2 approximately 580 MPa). Therefore, dimerization prevents the pressure unfolding of the monomer.
磷酸丙糖异构酶(TIM)是一种由两个相同的(β/α)8桶状结构组成的二聚体酶。在这项工作中,我们比较了溶组织内阿米巴(EhTIM)和面包酵母(yTIM)中TIM的去折叠和重折叠过程。在盐酸胍诱导的EhTIM去折叠过程中检测到了一个单体中间体。发现该中间体的热力学、光谱、催化和流体力学性质与先前在盐酸胍中观察到的yTIM单体中间体的性质非常相似。两种TIM的单体去折叠都是可逆的;然而,解离步骤在yTIM中是可逆的,而在EhTIM中是不可逆的。在盐酸胍存在下高压诱导的单体去折叠是一个可逆过程。在0.7 - 1.2 M盐酸胍范围内获得了ΔGUnf、ΔVUnf和P1/2。将这些热力学参数线性外推到无变性剂时,两种中间体显示出相同的值。在实验误差范围内,为EhTIM和yTIM单体中间体计算的ΔVUnfH2O值相同(分别为-57±10和-76±14 mL/mol)。这些ΔVUnf H2O值小于报道的类似大小单体蛋白去折叠的值,表明TIM中间体仅部分水合。|ΔVUnf|随变性剂浓度增加;这种行为可能与盐酸胍和压力诱导的未折叠状态的结构变化有关。根据获得的热力学参数预测,在无变性剂时,压力会在二聚体解离(P1/2约为580 MPa)之前诱导单体去折叠(P1/2约为140 MPa)。因此,二聚化可防止单体因压力而发生去折叠。