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通过非局部连续介质静电方法评估内部水溶剂结构对蛋白质-溶剂界面静电相互作用的影响。

Evaluation of the influence of the internal aqueous solvent structure on electrostatic interactions at the protein-solvent interface by nonlocal continuum electrostatic approach.

作者信息

Rubinstein Alexander, Sherman Simon

机构信息

Eppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, 986805 Nebraska Medical Center, Omaha, NE 68198-6805, USA.

出版信息

Biopolymers. 2007;87(2-3):149-64. doi: 10.1002/bip.20808.

Abstract

The dielectric properties of the polar solvent on the protein-solvent interface at small intercharge distances are still poorly explored. To deconvolute this problem and to evaluate the pair-wise electrostatic interaction (PEI) energies of the point charges located at the protein-solvent interface we used a nonlocal (NL) electrostatic approach along with a static NL dielectric response function of water. The influence of the aqueous solvent microstructure (determined by a strong nonelectrostatic correlation effect between water dipoles within the orientational Debye polarization mode) on electrostatic interactions at the interface was studied in our work. It was shown that the PEI energies can be significantly higher than the energies evaluated by the classical (local) consideration, treating water molecules as belonging to the bulk solvent with a high dielectric constant. Our analysis points to the existence of a rather extended, effective low-dielectric interfacial water shell on the protein surface. The main dielectric properties of this shell (effective thickness together with distance- and orientation-dependent dielectric permittivity function) were evaluated. The dramatic role of this shell was demonstrated when estimating the protein association rate constants.

摘要

在小电荷间距下,极性溶剂在蛋白质 - 溶剂界面处的介电性质仍未得到充分研究。为了剖析这个问题并评估位于蛋白质 - 溶剂界面处的点电荷的成对静电相互作用(PEI)能量,我们使用了一种非局部(NL)静电方法以及水的静态NL介电响应函数。在我们的工作中,研究了水性溶剂微观结构(由取向德拜极化模式内水分子之间强烈的非静电相关效应决定)对界面静电相互作用的影响。结果表明,PEI能量可能显著高于通过经典(局部)考虑所评估的能量,经典方法将水分子视为具有高介电常数的本体溶剂的一部分。我们的分析表明,在蛋白质表面存在一个相当扩展的、有效的低介电界面水壳。评估了该水壳的主要介电性质(有效厚度以及与距离和取向相关的介电常数函数)。在估计蛋白质缔合速率常数时,证明了该水壳的重要作用。

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