Bloom Jesse D, Lu Zhongyi, Chen David, Raval Alpan, Venturelli Ophelia S, Arnold Frances H
Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA.
BMC Biol. 2007 Jul 17;5:29. doi: 10.1186/1741-7007-5-29.
An important question is whether evolution favors properties such as mutational robustness or evolvability that do not directly benefit any individual but can influence the course of future evolution. Functionally similar proteins can differ substantially in their robustness to mutations and capacity to evolve new functions, but it has remained unclear whether any of these differences might be due to evolutionary selection for these properties.
Here, we use laboratory experiments to demonstrate that evolution favors protein mutational robustness if the evolving population is sufficiently large. We neutrally evolve cytochrome P450 proteins under identical selection pressures and mutation rates in populations of different sizes, and show that proteins from the larger and thus more polymorphic population tend towards higher mutational robustness. Proteins from the larger population also evolve greater stability, a biophysical property that is known to enhance both mutational robustness and evolvability. The excess mutational robustness and stability is well described by mathematical theory, and can be quantitatively related to the way that the proteins occupy their neutral network.
Our work is the first experimental demonstration of the general tendency of evolution to favor mutational robustness and protein stability in highly polymorphic populations. We suggest that this phenomenon could contribute to the mutational robustness and evolvability of viruses and bacteria that exist in large populations.
一个重要的问题是,进化是否会青睐诸如突变稳健性或可进化性等特性,这些特性不会直接使任何个体受益,但会影响未来的进化进程。功能相似的蛋白质在对突变的稳健性和进化新功能的能力方面可能有很大差异,但尚不清楚这些差异是否可能是由于对这些特性的进化选择所致。
在这里,我们通过实验室实验证明,如果进化群体足够大,进化会青睐蛋白质的突变稳健性。我们在不同大小的群体中,在相同的选择压力和突变率下对细胞色素P450蛋白进行中性进化,结果表明,来自较大且因此多态性更高的群体的蛋白质往往具有更高的突变稳健性。来自较大群体的蛋白质也进化出更高的稳定性,这是一种已知能增强突变稳健性和可进化性的生物物理特性。多余的突变稳健性和稳定性可以用数学理论很好地描述,并且可以与蛋白质占据其中性网络的方式定量相关。
我们的工作首次通过实验证明了进化在高度多态性群体中倾向于突变稳健性和蛋白质稳定性的一般趋势。我们认为,这种现象可能有助于解释存在于大量群体中的病毒和细菌的突变稳健性和可进化性。