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树突状生长模型的数学基础。

Mathematical foundations of the dendritic growth models.

作者信息

Villacorta José A, Castro Jorge, Negredo Pilar, Avendaño Carlos

机构信息

Department of Anatomy, Histology and Neuroscience, School of Medicine, Universidad Autónoma de Madrid, c/ Arzobispo Morcillo s/n, 28029 Madrid, Spain.

出版信息

J Math Biol. 2007 Nov;55(5-6):817-59. doi: 10.1007/s00285-007-0113-7. Epub 2007 Jul 24.

DOI:10.1007/s00285-007-0113-7
PMID:17646989
Abstract

At present two growth models describe successfully the distribution of size and topological complexity in populations of dendritic trees with considerable accuracy and simplicity, the BE model (Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997) and the S model (Van Pelt and Verwer in Bull. Math. Biol. 48:197-211, 1986). This paper discusses the mathematical basis of these models and analyzes quantitatively the relationship between the BE model and the S model assumed in the literature by developing a new explicit equation describing the BES model (a dendritic growth model integrating the features of both preceding models; Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997). In numerous studies it is implicitly presupposed that the S model is conditionally linked to the BE model (Granato and Van Pelt in Brain Res. Dev. Brain Res. 142:223-227, 2003; Uylings and Van Pelt in Network 13:397-414, 2002; Van Pelt, Dityatev and Uylings in J. Comp. Neurol. 387:325-340, 1997; Van Pelt and Schierwagen in Math. Biosci. 188:147-155, 2004; Van Pelt and Uylings in Network. 13:261-281, 2002; Van Pelt, Van Ooyen and Uylings in Modeling Dendritic Geometry and the Development of Nerve Connections, pp 179, 2000). In this paper we prove the non-exactness of this assumption, quantify involved errors and determine the conditions under which the BE and S models can be separately used instead of the BES model, which is more exact but considerably more difficult to apply. This study leads to a novel expression describing the BE model in an analytical closed form, much more efficient than the traditional iterative equation (Van Pelt et al. in J. Comp. Neurol. 387:325-340, 1997) in many neuronal classes. Finally we propose a new algorithm in order to obtain the values of the parameters of the BE model when this growth model is matched to experimental data, and discuss its advantages and improvements over the more commonly used procedures.

摘要

目前,有两种生长模型能够以相当的准确性和简便性成功描述树突状树突群体中大小和拓扑复杂性的分布,即BE模型(Van Pelt等人,《比较神经学杂志》387:325 - 340,1997年)和S模型(Van Pelt和Verwer,《数学生物学公报》48:197 - 211,1986年)。本文讨论了这些模型的数学基础,并通过推导一个描述BES模型(一种整合了前两种模型特征的树突生长模型;Van Pelt等人,《比较神经学杂志》387:325 - 340,1997年)的新显式方程,定量分析了文献中假设的BE模型与S模型之间的关系。在众多研究中,人们隐含地假定S模型与BE模型有条件地相关联(Granato和Van Pelt,《脑研究与脑发育研究》142:223 - 227,2003年;Uylings和Van Pelt,《网络》13:397 - 414,2002年;Van Pelt、Dityatev和Uylings,《比较神经学杂志》387:325 - 340,1997年;Van Pelt和Schierwagen,《数学生物科学》188:147 - 155,2004年;Van Pelt和Uylings,《网络》13:261 - 281,2002年;Van Pelt、Van Ooyen和Uylings,《树突几何建模与神经连接的发育》,第179页,2000年)。在本文中,我们证明了这一假设的不精确性,量化了其中涉及的误差,并确定了在哪些条件下可以分别使用BE模型和S模型,而不是使用更精确但应用起来困难得多的BES模型。这项研究得出了一个以解析封闭形式描述BE模型的新表达式,在许多神经元类别中比传统的迭代方程(Van Pelt等人,《比较神经学杂志》387:325 - 340,1997年)效率高得多。最后,我们提出了一种新算法,以便在将该生长模型与实验数据匹配时获得BE模型参数的值,并讨论了其相对于更常用方法的优点和改进之处。

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